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20142025

Research activity per year

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  • HBO1 functions as an epigenetic barrier to hepatocyte plasticity and reprogramming during liver injury

    Yuan, W. C., Earl, A. S., Ma, S., Alcedo, K., Russell, J. O., Duarte, F. M., Chu, Y. T., Chang, P. C., Chen, H. Y., Chi, H. H., Zhu, Q., Rodriguez-Fraticelli, A. E., Patel, S. H., Lee, Y. R., Buenrostro, J. D. & Camargo, F. D., 5 Jun 2025, In: Cell Stem Cell. 32, 6, p. 990-1005.e8

    Research output: Contribution to journalArticlepeer-review

  • Multiscale footprints reveal the organization of cis-regulatory elements

    Hu, Y., Horlbeck, M. A., Zhang, R., Ma, S., Shrestha, R., Kartha, V. K., Duarte, F. M., Hock, C., Savage, R. E., Labade, A., Kletzien, H., Meliki, A., Castillo, A., Durand, N. C., Mattei, E., Anderson, L. J., Tay, T., Earl, A. S., Shoresh, N. & Epstein, C. B. & 2 others, Wagers, A. J. & Buenrostro, J. D., 20 Feb 2025, In: Nature. 638, 8051, p. 779-786 8 p., 4267.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    7 Scopus citations
  • BACH2 regulates diversification of regulatory and proinflammatory chromatin states in TH17 cells

    Thakore, P. I., Schnell, A., Huang, L., Zhao, M., Hou, Y., Christian, E., Zaghouani, S., Wang, C., Singh, V., Singaraju, A., Krishnan, R. K., Kozoriz, D., Ma, S., Sankar, V., Notarbartolo, S., Buenrostro, J. D., Sallusto, F., Patsopoulos, N. A., Rozenblatt-Rosen, O. & Kuchroo, V. K. & 1 others, Regev, A., Aug 2024, In: Nature Immunology. 25, 8, p. 1395-1410 16 p.

    Research output: Contribution to journalArticlepeer-review

    10 Scopus citations
  • A transcription factor atlas of directed differentiation

    Joung, J., Ma, S., Tay, T., Geiger-Schuller, K. R., Kirchgatterer, P. C., Verdine, V. K., Guo, B., Arias-Garcia, M. A., Allen, W. E., Singh, A., Kuksenko, O., Abudayyeh, O. O., Gootenberg, J. S., Fu, Z., Macrae, R. K., Buenrostro, J. D., Regev, A. & Zhang, F., 5 Jan 2023, In: Cell. 186, 1, p. 209-229.e26

    Research output: Contribution to journalArticlepeer-review

    Open Access
    106 Scopus citations
  • Droplet-based bisulfite sequencing for high-throughput profiling of single-cell DNA methylomes

    Zhang, Q., Ma, S., Liu, Z., Zhu, B., Zhou, Z., Li, G., Meana, J. J., González-Maeso, J. & Lu, C., Dec 2023, In: Nature Communications. 14, 1, 4672.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    16 Scopus citations