Workflow reuse in practice: A study of neuroimaging pipeline users

Daniel Garijo, Oscar Corcho, Yolanda Gil, Meredith N. Braskie, Derrek Hibar, Xue Hua, Neda Jahanshad, Paul Thompson, Arthur W. Toga

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

7 Scopus citations

Abstract

Workflow reuse is a major benefit of workflow systems and shared workflow repositories, but there are barely any studies that quantify the degree of reuse of workflows or the practical barriers that may stand in the way of successful reuse. In our own work, we hypothesize that defining workflow fragments improves reuse, since end-to-end workflows may be very specific and only partially reusable by others. This paper reports on a study of the current use of workflows and workflow fragments in labs that use the LONI Pipeline, a popular workflow system used mainly for neuroimaging research that enables users to define and reuse workflow fragments. We present an overview of the benefits of workflows and workflow fragments reported by users in informal discussions. We also report on a survey of researchers in a lab that has the LONI Pipeline installed, asking them about their experiences with reuse of workflow fragments and the actual benefits they perceive. This leads to quantifiable indicators of the reuse of workflows and workflow fragments in practice. Finally, we discuss barriers to further adoption of workflow fragments and workflow reuse that motivate further work.

Original languageEnglish
Title of host publicationProceedings - 2014 IEEE 10th International Conference on eScience, eScience 2014
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages239-246
Number of pages8
ISBN (Electronic)9781479942886
DOIs
StatePublished - 2 Dec 2014
Externally publishedYes
Event10th IEEE International Conference on eScience, eScience 2014 - Guaruja, Brazil
Duration: 20 Oct 201424 Oct 2014

Publication series

NameProceedings - 2014 IEEE 10th International Conference on eScience, eScience 2014
Volume1

Conference

Conference10th IEEE International Conference on eScience, eScience 2014
Country/TerritoryBrazil
CityGuaruja
Period20/10/1424/10/14

Keywords

  • LONI Pipeline
  • scientific workflows
  • workflow fragments
  • workflow reuse

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