TY - JOUR
T1 - Simplifying synthesis of the expanding glioblastoma literature
T2 - a topic modeling approach
AU - Karabacak, Mert
AU - Jagtiani, Pemla
AU - Carrasquilla, Alejandro
AU - Jain, Ankita
AU - Germano, Isabelle M.
AU - Margetis, Konstantinos
N1 - Publisher Copyright:
© The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2024.
PY - 2024/9
Y1 - 2024/9
N2 - Purpose: Our study aims to discover the leading topics within glioblastoma (GB) research, and to examine if these topics have “hot” or “cold” trends. Additionally, we aim to showcase the potential of natural language processing (NLP) in facilitating research syntheses, offering an efficient strategy to dissect the landscape of academic literature in the realm of GB research. Methods: The Scopus database was queried using “glioblastoma” as the search term, in the “TITLE” and “KEY” fields. BERTopic, an NLP-based topic modeling (TM) method, was used for probabilistic TM. We specified a minimum topic size of 300 documents and 5% probability cutoff for outlier detection. We labeled topics based on keywords and representative documents and visualized them with word clouds. Linear regression models were utilized to identify “hot” and “cold” topic trends per decade. Results: Our TM analysis categorized 43,329 articles into 15 distinct topics. The most common topics were Genomics, Survival, Drug Delivery, and Imaging, while the least common topics were Surgical Resection, MGMT Methylation, and Exosomes. The hottest topics over the 2020s were Viruses and Oncolytic Therapy, Anticancer Compounds, and Exosomes, while the cold topics were Surgical Resection, Angiogenesis, and Tumor Metabolism. Conclusion: Our NLP methodology provided an extensive analysis of GB literature, revealing valuable insights about historical and contemporary patterns difficult to discern with traditional techniques. The outcomes offer guidance for research directions, policy, and identifying emerging trends. Our approach could be applied across research disciplines to summarize and examine scholarly literature, guiding future exploration.
AB - Purpose: Our study aims to discover the leading topics within glioblastoma (GB) research, and to examine if these topics have “hot” or “cold” trends. Additionally, we aim to showcase the potential of natural language processing (NLP) in facilitating research syntheses, offering an efficient strategy to dissect the landscape of academic literature in the realm of GB research. Methods: The Scopus database was queried using “glioblastoma” as the search term, in the “TITLE” and “KEY” fields. BERTopic, an NLP-based topic modeling (TM) method, was used for probabilistic TM. We specified a minimum topic size of 300 documents and 5% probability cutoff for outlier detection. We labeled topics based on keywords and representative documents and visualized them with word clouds. Linear regression models were utilized to identify “hot” and “cold” topic trends per decade. Results: Our TM analysis categorized 43,329 articles into 15 distinct topics. The most common topics were Genomics, Survival, Drug Delivery, and Imaging, while the least common topics were Surgical Resection, MGMT Methylation, and Exosomes. The hottest topics over the 2020s were Viruses and Oncolytic Therapy, Anticancer Compounds, and Exosomes, while the cold topics were Surgical Resection, Angiogenesis, and Tumor Metabolism. Conclusion: Our NLP methodology provided an extensive analysis of GB literature, revealing valuable insights about historical and contemporary patterns difficult to discern with traditional techniques. The outcomes offer guidance for research directions, policy, and identifying emerging trends. Our approach could be applied across research disciplines to summarize and examine scholarly literature, guiding future exploration.
KW - Glioblastoma
KW - Hot topic
KW - Natural language processing
KW - Research trends
KW - Topic modeling
UR - http://www.scopus.com/inward/record.url?scp=85198061770&partnerID=8YFLogxK
U2 - 10.1007/s11060-024-04762-8
DO - 10.1007/s11060-024-04762-8
M3 - Article
AN - SCOPUS:85198061770
SN - 0167-594X
VL - 169
SP - 601
EP - 611
JO - Journal of Neuro-Oncology
JF - Journal of Neuro-Oncology
IS - 3
ER -