Sequences of Zika virus genomes from a pediatric cohort in Nicaragua

Lauren M. Oldfield; Nadia Fedorova; Vinita Puri; Susmita Shrivastava; Paolo Amedeo; Alan Durbin; Iara Rocchi; Torrey Williams; Reed S. Shabman; Gene S. Tan; Angel Balmaseda; Guillermina Kuan; Saira Saborio; Aubree Gordon; Eva Harris; Brett E. Pickett

doi:10.1128/genomeA.00498-18

Sequences of Zika virus genomes from a pediatric cohort in Nicaragua

Lauren M. Oldfield
, Nadia Fedorova
, Vinita Puri
, Susmita Shrivastava
, Paolo Amedeo
, Alan Durbin
, Iara Rocchi
, Torrey Williams
, Reed S. Shabman
, Gene S. Tan
, Angel Balmaseda
, Guillermina Kuan
, Saira Saborio
, Aubree Gordon
, Eva Harris
, Brett E. Pickett

Research output: Contribution to journal › Article › peer-review

Abstract

We report here the whole-genome sequence of 11 Zika virus (ZIKV) samples from six pediatric patients in Nicaragua. Serum samples were collected, and ZIKV was isolated in tissue culture. Both serum and virus isolates were sequenced. The consensus ZIKV genomes are greater than 99% identical to each other.

Original language	English
Article number	e00498-18
Journal	Genome Announcements
Volume	6
Issue number	24
DOIs	https://doi.org/10.1128/genomeA.00498-18
State	Published - 1 Jun 2018
Externally published	Yes

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Oldfield, L. M., Fedorova, N., Puri, V., Shrivastava, S., Amedeo, P., Durbin, A., Rocchi, I., Williams, T., Shabman, R. S., Tan, G. S., Balmaseda, A., Kuan, G., Saborio, S., Gordon, A., Harris, E., & Pickett, B. E. (2018). Sequences of Zika virus genomes from a pediatric cohort in Nicaragua. Genome Announcements, 6(24), Article e00498-18. https://doi.org/10.1128/genomeA.00498-18

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abstract = "We report here the whole-genome sequence of 11 Zika virus (ZIKV) samples from six pediatric patients in Nicaragua. Serum samples were collected, and ZIKV was isolated in tissue culture. Both serum and virus isolates were sequenced. The consensus ZIKV genomes are greater than 99\% identical to each other.",

author = "Oldfield, \{Lauren M.\} and Nadia Fedorova and Vinita Puri and Susmita Shrivastava and Paolo Amedeo and Alan Durbin and Iara Rocchi and Torrey Williams and Shabman, \{Reed S.\} and Tan, \{Gene S.\} and Angel Balmaseda and Guillermina Kuan and Saira Saborio and Aubree Gordon and Eva Harris and Pickett, \{Brett E.\}",

note = "Publisher Copyright: {\textcopyright} 2018 Oldfield et al.",

year = "2018",

month = jun,

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doi = "10.1128/genomeA.00498-18",

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T1 - Sequences of Zika virus genomes from a pediatric cohort in Nicaragua

AU - Oldfield, Lauren M.

AU - Fedorova, Nadia

AU - Puri, Vinita

AU - Shrivastava, Susmita

AU - Amedeo, Paolo

AU - Durbin, Alan

AU - Rocchi, Iara

AU - Williams, Torrey

AU - Shabman, Reed S.

AU - Tan, Gene S.

AU - Balmaseda, Angel

AU - Kuan, Guillermina

AU - Saborio, Saira

AU - Gordon, Aubree

AU - Harris, Eva

AU - Pickett, Brett E.

PY - 2018/6/1

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N2 - We report here the whole-genome sequence of 11 Zika virus (ZIKV) samples from six pediatric patients in Nicaragua. Serum samples were collected, and ZIKV was isolated in tissue culture. Both serum and virus isolates were sequenced. The consensus ZIKV genomes are greater than 99% identical to each other.

AB - We report here the whole-genome sequence of 11 Zika virus (ZIKV) samples from six pediatric patients in Nicaragua. Serum samples were collected, and ZIKV was isolated in tissue culture. Both serum and virus isolates were sequenced. The consensus ZIKV genomes are greater than 99% identical to each other.

UR - https://www.scopus.com/pages/publications/85048586025

U2 - 10.1128/genomeA.00498-18

DO - 10.1128/genomeA.00498-18

M3 - Article

AN - SCOPUS:85048586025

SN - 2169-8287

VL - 6

JO - Genome Announcements

JF - Genome Announcements

IS - 24

M1 - e00498-18

ER -

Sequences of Zika virus genomes from a pediatric cohort in Nicaragua

Abstract

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