Quantitative evaluation of protein-DNA interactions using an optimized knowledge-based potential

Keyphrases

• Binding Affinity 75%
• Binding Energy 25%
• Binding Motif 75%
• Body Interaction 25%
• Computational Evaluation 25%
• Correlation Coefficient 50%
• Cyclic Adenosine Monophosphate (cAMP) 50%
• Distance Dependence 50%
• DNA Binding Sites 25%
• DNA Complex 25%
• DNA nucleotides 25%
• DNA Sequencing 50%
• Escherichia Coli 25%
• Genome Annotation 25%
• Genome-scale 25%
• High Correlation 25%
• Interacting Proteins 50%
• Knowledge-based Potential 100%
• Large Pools 25%
• Large-scale Search 25%
• Multi-body Interaction 25%
• Protein Residue 50%
• Protein-DNA Complex 100%
• Protein-DNA Interaction 100%
• Quantitative Evaluation 100%
• Regulatory Proteins 50%
• Sequence-based Approach 25%
• Solvation 25%
• Structural Deformation 25%
• Structural Information 25%
• Three-body 25%
• Transcription Factor 50%
• Transcription Factor Binding Sites 25%
• Trinucleotide 25%
• Two-body 25%
• Zinc Finger Protein 25%

Biochemistry, Genetics and Molecular Biology

• Binding Affinity 100%
• Cyclic Adenosine Monophosphate 66%
• DNA Binding Site 33%
• DNA Protein Complex 66%
• DNA Sequence 66%
• Escherichia coli 33%
• Genome Annotation 33%
• Protein-DNA Interaction 100%
• Quantitative Technique 100%
• Solvation 33%
• Transcription Factors 100%