TY - JOUR
T1 - Quantitative chest computed tomography combined with plasma cytokines predict outcomes in COVID-19 patients
AU - Carbonell, Guillermo
AU - Del Valle, Diane Marie
AU - Gonzalez-Kozlova, Edgar
AU - Marinelli, Brett
AU - Klein, Emma
AU - El Homsi, Maria
AU - Stocker, Daniel
AU - Chung, Michael
AU - Bernheim, Adam
AU - Simons, Nicole W.
AU - Xiang, Jiani
AU - Nirenberg, Sharon
AU - Kovatch, Patricia
AU - Lewis, Sara
AU - Merad, Miriam
AU - Gnjatic, Sacha
AU - Taouli, Bachir
N1 - Funding Information:
Sacha Gnjatic, Edgar Gonzalez-Kozlova, Diane Marie Del Valle and Miriam Merad were supported by National Cancer Institute grants U24 ( CA224319 ) and U01 ( DK124165 ).
Funding Information:
B.T. and G.C. were supported by NCI R01 grants R01CA249765 and R01DK113272.
Funding Information:
The authors wish to acknowledge Rajiv Pande and Martin Putnam at Bio-techne for helping to provide instruments and assay kits for ELLA testing in a CLIA environment in the timeliest possible way during the health crisis. Additionally, this work was supported in part by the computational resources and staff expertise provided by Scientific Computing at the Icahn School of Medicine at Mount Sinai.
Publisher Copyright:
© 2022 The Author(s)
PY - 2022/8
Y1 - 2022/8
N2 - Despite extraordinary international efforts to dampen the spread and understand the mechanisms behind SARS-CoV-2 infections, accessible predictive biomarkers directly applicable in the clinic are yet to be discovered. Recent studies have revealed that diverse types of assays bear limited predictive power for COVID-19 outcomes. Here, we harness the predictive power of chest computed tomography (CT) in combination with plasma cytokines using a machine learning and k-fold cross-validation approach for predicting death during hospitalization and maximum severity degree in COVID-19 patients. Patients (n = 152) from the Mount Sinai Health System in New York with plasma cytokine assessment and a chest CT within five days from admission were included. Demographics, clinical, and laboratory variables, including plasma cytokines (IL-6, IL-8, and TNF-α), were collected from the electronic medical record. We found that CT quantitative alone was better at predicting severity (AUC 0.81) than death (AUC 0.70), while cytokine measurements alone better-predicted death (AUC 0.70) compared to severity (AUC 0.66). When combined, chest CT and plasma cytokines were good predictors of death (AUC 0.78) and maximum severity (AUC 0.82). Finally, we provide a simple scoring system (nomogram) using plasma IL-6, IL-8, TNF-α, ground-glass opacities (GGO) to aerated lung ratio and age as new metrics that may be used to monitor patients upon hospitalization and help physicians make critical decisions and considerations for patients at high risk of death for COVID-19.
AB - Despite extraordinary international efforts to dampen the spread and understand the mechanisms behind SARS-CoV-2 infections, accessible predictive biomarkers directly applicable in the clinic are yet to be discovered. Recent studies have revealed that diverse types of assays bear limited predictive power for COVID-19 outcomes. Here, we harness the predictive power of chest computed tomography (CT) in combination with plasma cytokines using a machine learning and k-fold cross-validation approach for predicting death during hospitalization and maximum severity degree in COVID-19 patients. Patients (n = 152) from the Mount Sinai Health System in New York with plasma cytokine assessment and a chest CT within five days from admission were included. Demographics, clinical, and laboratory variables, including plasma cytokines (IL-6, IL-8, and TNF-α), were collected from the electronic medical record. We found that CT quantitative alone was better at predicting severity (AUC 0.81) than death (AUC 0.70), while cytokine measurements alone better-predicted death (AUC 0.70) compared to severity (AUC 0.66). When combined, chest CT and plasma cytokines were good predictors of death (AUC 0.78) and maximum severity (AUC 0.82). Finally, we provide a simple scoring system (nomogram) using plasma IL-6, IL-8, TNF-α, ground-glass opacities (GGO) to aerated lung ratio and age as new metrics that may be used to monitor patients upon hospitalization and help physicians make critical decisions and considerations for patients at high risk of death for COVID-19.
KW - COVID-19
KW - Chest CT
KW - Cytokines
KW - Radiology
KW - SARS-CoV-2
UR - http://www.scopus.com/inward/record.url?scp=85135963296&partnerID=8YFLogxK
U2 - 10.1016/j.heliyon.2022.e10166
DO - 10.1016/j.heliyon.2022.e10166
M3 - Article
AN - SCOPUS:85135963296
VL - 8
JO - Heliyon
JF - Heliyon
SN - 2405-8440
IS - 8
M1 - e10166
ER -