TY - JOUR
T1 - PTSD Biomarker Database
T2 - Deep dive metadatabase for PTSD biomarkers, visualizations and analysis tools
AU - Domingo-Fernández, Daniel
AU - Provost, Allison
AU - Kodamullil, Alpha Tom
AU - Marín-Llaó, Josep
AU - Lasseter, Heather
AU - Diaz, Kristophe
AU - Daskalakis, Nikolaos P.
AU - Lancashire, Lee
AU - Hofmann-Apitius, Martin
AU - Haas, Magali
N1 - Publisher Copyright:
© 2019 The Author(s) 2019. Published by Oxford University Press.
PY - 2019
Y1 - 2019
N2 - The PTSD Biomarker Database (PTSDDB) is a database that provides a landscape view of physiological markers being studied as putative biomarkers in the current post-traumatic stress disorder (PTSD) literature to enable researchers to explore and compare findings quickly. The PTSDDB currently contains over 900 biomarkers and their relevant information from 109 original articles published from 1997 to 2017. Further, the curated content stored in this database is complemented by a web application consisting of multiple interactive visualizations that enable the investigation of biomarker knowledge in PTSD (e.g. clinical study metadata, biomarker findings, experimental methods, etc.) by compiling results from biomarker studies to visualize the level of evidence for single biomarkers and across functional categories. This resource is the first attempt, to the best of our knowledge, to capture and organize biomarker and metadata in the area of PTSD for storage in a comprehensive database that may, in turn, facilitate future analysis and research in the field.
AB - The PTSD Biomarker Database (PTSDDB) is a database that provides a landscape view of physiological markers being studied as putative biomarkers in the current post-traumatic stress disorder (PTSD) literature to enable researchers to explore and compare findings quickly. The PTSDDB currently contains over 900 biomarkers and their relevant information from 109 original articles published from 1997 to 2017. Further, the curated content stored in this database is complemented by a web application consisting of multiple interactive visualizations that enable the investigation of biomarker knowledge in PTSD (e.g. clinical study metadata, biomarker findings, experimental methods, etc.) by compiling results from biomarker studies to visualize the level of evidence for single biomarkers and across functional categories. This resource is the first attempt, to the best of our knowledge, to capture and organize biomarker and metadata in the area of PTSD for storage in a comprehensive database that may, in turn, facilitate future analysis and research in the field.
UR - http://www.scopus.com/inward/record.url?scp=85068994081&partnerID=8YFLogxK
U2 - 10.1093/database/baz081
DO - 10.1093/database/baz081
M3 - Article
C2 - 31260040
AN - SCOPUS:85068994081
SN - 1758-0463
VL - 2019
JO - Database : the journal of biological databases and curation
JF - Database : the journal of biological databases and curation
IS - 1
M1 - baz081
ER -