Modular clustering of protein-protein interaction networks

Nassim Sohaee; Christian V. Forst

doi:10.1109/CIBCB.2010.5510590

Modular clustering of protein-protein interaction networks

Nassim Sohaee, Christian V. Forst

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

2 Scopus citations

Abstract

Identifying the modular structures in proteinprotein interaction networks is crucial to the understanding of the organization and function of biological systems. In this paper we introduce the concept of critical module in a network and propose an efficient algorithm to find all critical modules in a given network. Finally we tested the proposed algorithm on Yeast protein interaction data set.

Original language	English
Title of host publication	2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010
Pages	20-23
Number of pages	4
DOIs	https://doi.org/10.1109/CIBCB.2010.5510590
State	Published - 2010
Externally published	Yes
Event	2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010 - Montreal, QC, Canada Duration: 2 May 2010 → 5 May 2010

Publication series

Name	2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010

Conference

Conference	2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010
Country/Territory	Canada
City	Montreal, QC
Period	2/05/10 → 5/05/10

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10.1109/CIBCB.2010.5510590

Cite this

Sohaee, N., & Forst, C. V. (2010). Modular clustering of protein-protein interaction networks. In 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010 (pp. 20-23). Article 5510590 (2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010). https://doi.org/10.1109/CIBCB.2010.5510590

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title = "Modular clustering of protein-protein interaction networks",

abstract = "Identifying the modular structures in proteinprotein interaction networks is crucial to the understanding of the organization and function of biological systems. In this paper we introduce the concept of critical module in a network and propose an efficient algorithm to find all critical modules in a given network. Finally we tested the proposed algorithm on Yeast protein interaction data set.",

author = "Nassim Sohaee and Forst, {Christian V.}",

year = "2010",

doi = "10.1109/CIBCB.2010.5510590",

language = "English",

isbn = "9781424467662",

series = "2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010",

pages = "20--23",

booktitle = "2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010",

note = "2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010 ; Conference date: 02-05-2010 Through 05-05-2010",

}

Sohaee, N & Forst, CV 2010, Modular clustering of protein-protein interaction networks. in 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010., 5510590, 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010, pp. 20-23, 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010, Montreal, QC, Canada, 2/05/10. https://doi.org/10.1109/CIBCB.2010.5510590

Modular clustering of protein-protein interaction networks. / Sohaee, Nassim; Forst, Christian V.
2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010. 2010. p. 20-23 5510590 (2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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AU - Forst, Christian V.

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DO - 10.1109/CIBCB.2010.5510590

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Modular clustering of protein-protein interaction networks

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