m6A regulators are differently expressed and correlated with immune response of pancreatic adenocarcinoma

Tao Zhang, Ping Sheng, Yuting Jiang

Research output: Contribution to journalArticlepeer-review

10 Scopus citations

Abstract

Background: N6 methyladenosine (m6A) RNA methylation regulators play a key role in the occurrence and development of many tumors. However, the function of N6 methyladenosine (m6A) RNA methylation regulators in pancreatic adenocarcinoma (PAAD) has not been fully clarified. Methods: We used data set from GEPIA 2, UALCAN, TIMER, TISIDB, CBioPortal database to analyze the gene expression of 20 major m6A RNA methylation regulators. Results: Our study revealed that the irregularity of m6A regulators were associated with poor prognosis in PAAD. Meantime, 13 m6A regulators showed high expression in PAAD samples (ALKBH5, ELAVL1, FTO, HNRNPC, IGF2BP2, METTL14, METTL16 (METT10D), RBM15, VIRMA (KIAA1429), YTHDF1, YTHDF2, YTHDF3 and ZC3H13). In these regulators, we evaluated HNRNPC and IGF2BP2 were significantly correlated with worse outcomes and ALKBH5, IGF2BP2, METTL16 (METT10D), RBM15 were significantly correlated with PAAD in advanced stage. Moreover, we showed m6A regulators is correlated with Immuno-regulators' (Immunoinhibitors, Immunostimulators and MHC molecules) expression and levels of immune infiltration in PAAD. Bioinformatics further demonstrate m6A regulators were participated in revising in RNA processing. Conclusions: Our study investigated that the m6A regulatory factors may serve as a biomarker and a potential target of immunotherapy for PAAD.

Original languageEnglish
Pages (from-to)2805-2822
Number of pages18
JournalJournal of Cancer Research and Clinical Oncology
Volume149
Issue number7
DOIs
StatePublished - Jul 2023
Externally publishedYes

Keywords

  • Clinical prognosis
  • Immune infiltration
  • Pancreatic adenocarcinoma
  • RNA methylation
  • m6A regulators

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