TY - JOUR
T1 - Long genes are more frequently affected by somatic mutations and show reduced expression in Alzheimer's disease
T2 - Implications for disease etiology
AU - Soheili-Nezhad, Sourena
AU - van der Linden, Robert J.
AU - Olde Rikkert, Marcel
AU - Sprooten, Emma
AU - Poelmans, Geert
N1 - Publisher Copyright:
© 2020 The Authors. Alzheimer's & Dementia published by Wiley Periodicals, Inc. on behalf of Alzheimer's Association.
PY - 2021/3
Y1 - 2021/3
N2 - Aging, the greatest risk factor for Alzheimer's disease (AD), may lead to the accumulation of somatic mutations in neurons. We investigated whether somatic mutations, specifically in longer genes, are implicated in AD etiology. First, we modeled the theoretical likelihood of genes being affected by aging-induced somatic mutations, dependent on their length. We then tested this model and found that long genes are indeed more affected by somatic mutations and that their expression is more frequently reduced in AD brains. Furthermore, using gene-set enrichment analysis, we investigated the potential consequences of such long gene disruption. We found that long genes are involved in synaptic adhesion and other synaptic pathways that are predicted to be inhibited in the brains of AD patients. Taken together, our findings indicate that long gene–dependent synaptic impairment may contribute to AD pathogenesis.
AB - Aging, the greatest risk factor for Alzheimer's disease (AD), may lead to the accumulation of somatic mutations in neurons. We investigated whether somatic mutations, specifically in longer genes, are implicated in AD etiology. First, we modeled the theoretical likelihood of genes being affected by aging-induced somatic mutations, dependent on their length. We then tested this model and found that long genes are indeed more affected by somatic mutations and that their expression is more frequently reduced in AD brains. Furthermore, using gene-set enrichment analysis, we investigated the potential consequences of such long gene disruption. We found that long genes are involved in synaptic adhesion and other synaptic pathways that are predicted to be inhibited in the brains of AD patients. Taken together, our findings indicate that long gene–dependent synaptic impairment may contribute to AD pathogenesis.
KW - Alzheimer's disease
KW - DNA damage
KW - long genes
KW - somatic mutations
KW - synaptic adhesion
UR - http://www.scopus.com/inward/record.url?scp=85092610659&partnerID=8YFLogxK
U2 - 10.1002/alz.12211
DO - 10.1002/alz.12211
M3 - Article
C2 - 33075204
AN - SCOPUS:85092610659
SN - 1552-5260
VL - 17
SP - 489
EP - 499
JO - Alzheimer's and Dementia
JF - Alzheimer's and Dementia
IS - 3
ER -