Integrative approach identifies SLC6A20 and CXCR6 as putative causal genes for the COVID-19 GWAS signal in the 3p21.31 locus

Silva Kasela, Zharko Daniloski, Sailalitha Bollepalli, Tristan X. Jordan, Benjamin R. tenOever, Neville E. Sanjana, Tuuli Lappalainen

Research output: Contribution to journalArticlepeer-review

34 Scopus citations

Abstract

To date, the locus with the most robust human genetic association to COVID-19 severity is 3p21.31. Here, we integrate genome-scale CRISPR loss-of-function screens and eQTLs in diverse cell types and tissues to pinpoint genes underlying COVID-19 risk. Our findings identify SLC6A20 and CXCR6 as putative causal genes that modulate COVID-19 risk and highlight the usefulness of this integrative approach to bridge the divide between correlational and causal studies of human biology.

Original languageEnglish
Article number242
JournalGenome Biology
Volume22
Issue number1
DOIs
StatePublished - Dec 2021

Keywords

  • COVID-19
  • CRISPR
  • GWAS
  • SARS-CoV-2
  • eQTL

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