TY - JOUR
T1 - High-Resolution Mass Spectrometry for Human Exposomics
T2 - Expanding Chemical Space Coverage
AU - Lai, Yunjia
AU - Koelmel, Jeremy P.
AU - Walker, Douglas I.
AU - Price, Elliott J.
AU - Papazian, Stefano
AU - Manz, Katherine E.
AU - Castilla-Fernández, Delia
AU - Bowden, John A.
AU - Nikiforov, Vladimir
AU - David, Arthur
AU - Bessonneau, Vincent
AU - Amer, Bashar
AU - Seethapathy, Suresh
AU - Hu, Xin
AU - Lin, Elizabeth Z.
AU - Jbebli, Akrem
AU - McNeil, Brooklynn R.
AU - Barupal, Dinesh
AU - Cerasa, Marina
AU - Xie, Hongyu
AU - Kalia, Vrinda
AU - Nandakumar, Renu
AU - Singh, Randolph
AU - Tian, Zhenyu
AU - Gao, Peng
AU - Zhao, Yujia
AU - Froment, Jean
AU - Rostkowski, Pawel
AU - Dubey, Saurabh
AU - Coufalíková, Kateřina
AU - Seličová, Hana
AU - Hecht, Helge
AU - Liu, Sheng
AU - Udhani, Hanisha H.
AU - Restituito, Sophie
AU - Tchou-Wong, Kam Meng
AU - Lu, Kun
AU - Martin, Jonathan W.
AU - Warth, Benedikt
AU - Godri Pollitt, Krystal J.
AU - Klánová, Jana
AU - Fiehn, Oliver
AU - Metz, Thomas O.
AU - Pennell, Kurt D.
AU - Jones, Dean P.
AU - Miller, Gary W.
N1 - Publisher Copyright:
© 2024 The Authors. Published by American Chemical Society.
PY - 2024/7/23
Y1 - 2024/7/23
N2 - In the modern “omics” era, measurement of the human exposome is a critical missing link between genetic drivers and disease outcomes. High-resolution mass spectrometry (HRMS), routinely used in proteomics and metabolomics, has emerged as a leading technology to broadly profile chemical exposure agents and related biomolecules for accurate mass measurement, high sensitivity, rapid data acquisition, and increased resolution of chemical space. Non-targeted approaches are increasingly accessible, supporting a shift from conventional hypothesis-driven, quantitation-centric targeted analyses toward data-driven, hypothesis-generating chemical exposome-wide profiling. However, HRMS-based exposomics encounters unique challenges. New analytical and computational infrastructures are needed to expand the analysis coverage through streamlined, scalable, and harmonized workflows and data pipelines that permit longitudinal chemical exposome tracking, retrospective validation, and multi-omics integration for meaningful health-oriented inferences. In this article, we survey the literature on state-of-the-art HRMS-based technologies, review current analytical workflows and informatic pipelines, and provide an up-to-date reference on exposomic approaches for chemists, toxicologists, epidemiologists, care providers, and stakeholders in health sciences and medicine. We propose efforts to benchmark fit-for-purpose platforms for expanding coverage of chemical space, including gas/liquid chromatography-HRMS (GC-HRMS and LC-HRMS), and discuss opportunities, challenges, and strategies to advance the burgeoning field of the exposome.
AB - In the modern “omics” era, measurement of the human exposome is a critical missing link between genetic drivers and disease outcomes. High-resolution mass spectrometry (HRMS), routinely used in proteomics and metabolomics, has emerged as a leading technology to broadly profile chemical exposure agents and related biomolecules for accurate mass measurement, high sensitivity, rapid data acquisition, and increased resolution of chemical space. Non-targeted approaches are increasingly accessible, supporting a shift from conventional hypothesis-driven, quantitation-centric targeted analyses toward data-driven, hypothesis-generating chemical exposome-wide profiling. However, HRMS-based exposomics encounters unique challenges. New analytical and computational infrastructures are needed to expand the analysis coverage through streamlined, scalable, and harmonized workflows and data pipelines that permit longitudinal chemical exposome tracking, retrospective validation, and multi-omics integration for meaningful health-oriented inferences. In this article, we survey the literature on state-of-the-art HRMS-based technologies, review current analytical workflows and informatic pipelines, and provide an up-to-date reference on exposomic approaches for chemists, toxicologists, epidemiologists, care providers, and stakeholders in health sciences and medicine. We propose efforts to benchmark fit-for-purpose platforms for expanding coverage of chemical space, including gas/liquid chromatography-HRMS (GC-HRMS and LC-HRMS), and discuss opportunities, challenges, and strategies to advance the burgeoning field of the exposome.
KW - chemical space
KW - chromatography
KW - environmental exposures
KW - exposome
KW - high-resolution mass spectrometry
KW - metabolomics
KW - non-targeted analysis
KW - toxicants
UR - http://www.scopus.com/inward/record.url?scp=85198562065&partnerID=8YFLogxK
U2 - 10.1021/acs.est.4c01156
DO - 10.1021/acs.est.4c01156
M3 - Review article
C2 - 38984754
AN - SCOPUS:85198562065
SN - 0013-936X
VL - 58
SP - 12784
EP - 12822
JO - Environmental Science and Technology
JF - Environmental Science and Technology
IS - 29
ER -