TY - JOUR
T1 - Genetic variants influencing human aging from late-onset Alzheimer's disease (LOAD) genome-wide association studies (GWAS)
AU - the Genetic and Environmental Risk for Alzheimer’s Disease (GERAD1) Consortium
AU - the Alzheimer’s Research UK (ARUK) Consortium
AU - Shi, Hui
AU - Belbin, Olivia
AU - Medway, Christopher
AU - Brown, Kristelle
AU - Kalsheker, Noor
AU - Carrasquillo, Minerva
AU - Proitsi, Petroula
AU - Powell, John
AU - Lovestone, Simon
AU - Goate, Alison
AU - Younkin, Steven
AU - Passmore, Peter
AU - Morgan, Kevin
AU - Passmore, Peter
AU - Craig, David
AU - Johnston, Janet
AU - McGuinness, Bernadette
AU - Todd, Stephen
AU - Heun, Reinhard
AU - Kölsch, Heike
AU - Kehoe, Patrick G.
AU - Hooper, Nigel M.
AU - Vardy, Emma R.L.C.
AU - Mann, David M.
AU - Brown, Kristelle
AU - Kalsheker, Noor
AU - Morgan, Kevin
AU - Smith, A. David
AU - Wilcock, Gordon
AU - Warden, Donald
AU - Holmes, Clive
N1 - Funding Information:
Cardiff University was supported by the Wellcome Trust, Medical Research Council (MRC), Alzheimer's Research Trust (ART) and the Welsh Assembly Government. ART supported sample collections at the Kings College, London, the South West Dementia Bank, Universities of Cambridge, Nottingham, Manchester, and Belfast. The Belfast group acknowledges support from the Alzheimer's Society, Ulster Garden Villages, N. Ireland R&D Office, and the Royal College of Physicians/Dunhill Medical Trust. The MRC and Mercer's Institute for Research on Ageing supported the Trinity College group. The South West Dementia Brain Bank acknowledges support from Bristol Research into Alzheimer's and Care of the Elderly. The Charles Wolfson Charitable Trust supported the OPTIMA group. Washington University was funded by NIH grants, Barnes Jewish Foundation, and the Charles and Joanne Knight Alzheimer's Research Initiative. Patient recruitment for the MRC Prion Unit/UCL Department of Neurodegenerative Disease collection was supported by the UCLH/UCL Biomedical Centre. LASER-AD was funded by Lundbeck SA. The Bonn group was supported by the German Federal Ministry of Education and Research (BMBF), Competence Network Dementia, and Competence Network Degenerative Dementia, and by the Alfried Krupp von Bohlen und Halbach-Stiftung. The GERAD1 Consortium also used samples ascertained by the NIMH AD Genetics Initiative.
Funding Information:
We thank all of our collaborators who provided data for this study (ARUK and GERAD1 consortia), together with the Alzheimer's disease centers that collected the samples, as well as the subjects and their families, whose help and participation made this work possible. This work was supported by Alzheimer's Research UK and the Big Lottery Fund.
PY - 2012/8/1
Y1 - 2012/8/1
N2 - Genetics plays a crucial role in human aging with up to 30% of those living to the mid-80s being determined by genetic variation. Survival to older ages likely entails an even greater genetic contribution. There is increasing evidence that genes implicated in age-related diseases, such as cancer and neuronal disease, play a role in affecting human life span. We have selected the 10 most promising late-onset Alzheimer's disease (LOAD) susceptibility genes identified through several recent large genome-wide association studies (GWAS). These 10 LOAD genes (APOE, CLU, PICALM, CR1, BIN1, ABCA7, MS4A6A, CD33, CD2AP, and EPHA1) have been tested for association with human aging in our dataset (1385 samples with documented age at death [AAD], age range: 58-108 years; mean age at death: 80.2) using the most significant single nucleotide polymorphisms (SNPs) found in the previous studies. Apart from the APOE locus (rs2075650) which showed compelling evidence of association with risk on human life span (p = 5.27 × 10-4), none of the other LOAD gene loci demonstrated significant evidence of association. In addition to examining the known LOAD genes, we carried out analyses using age at death as a quantitative trait. No genome-wide significant SNPs were discovered. Increasing sample size and statistical power will be imperative to detect genuine aging-associated variants in the future. In this report, we also discuss issues relating to the analysis of genome-wide association studies data from different centers and the bioinformatic approach required to distinguish spurious genome-wide significant signals from real SNP associations.
AB - Genetics plays a crucial role in human aging with up to 30% of those living to the mid-80s being determined by genetic variation. Survival to older ages likely entails an even greater genetic contribution. There is increasing evidence that genes implicated in age-related diseases, such as cancer and neuronal disease, play a role in affecting human life span. We have selected the 10 most promising late-onset Alzheimer's disease (LOAD) susceptibility genes identified through several recent large genome-wide association studies (GWAS). These 10 LOAD genes (APOE, CLU, PICALM, CR1, BIN1, ABCA7, MS4A6A, CD33, CD2AP, and EPHA1) have been tested for association with human aging in our dataset (1385 samples with documented age at death [AAD], age range: 58-108 years; mean age at death: 80.2) using the most significant single nucleotide polymorphisms (SNPs) found in the previous studies. Apart from the APOE locus (rs2075650) which showed compelling evidence of association with risk on human life span (p = 5.27 × 10-4), none of the other LOAD gene loci demonstrated significant evidence of association. In addition to examining the known LOAD genes, we carried out analyses using age at death as a quantitative trait. No genome-wide significant SNPs were discovered. Increasing sample size and statistical power will be imperative to detect genuine aging-associated variants in the future. In this report, we also discuss issues relating to the analysis of genome-wide association studies data from different centers and the bioinformatic approach required to distinguish spurious genome-wide significant signals from real SNP associations.
KW - Aging
KW - GWAS
KW - Genes
KW - Late onset Alzheimer's disease
KW - Lifespan
UR - http://www.scopus.com/inward/record.url?scp=84861906883&partnerID=8YFLogxK
U2 - 10.1016/j.neurobiolaging.2012.02.014
DO - 10.1016/j.neurobiolaging.2012.02.014
M3 - Article
C2 - 22445811
AN - SCOPUS:84861906883
SN - 0197-4580
VL - 33
SP - 1849.e5-1849.e18
JO - Neurobiology of Aging
JF - Neurobiology of Aging
IS - 8
ER -