TY - JOUR
T1 - Disease-drug pairs revealed by computational genomic connectivity mapping on GBA1 deficient, Gaucher disease mice
AU - Yuen, Tony
AU - Iqbal, Jameel
AU - Zhu, Ling Ling
AU - Sun, Li
AU - Lin, Aiping
AU - Zhao, Hongyu
AU - Liu, Jun
AU - Mistry, Pramod K.
AU - Zaidi, Mone
N1 - Funding Information:
PKM is supported by NIDDK K24DK066306 Clinical Investigator Award and a Gaucher Generation Program Grant. MZ and LS are supported by the National Institutes of Health, namely the National Institute on Aging ( AG 023176 , AG 040132 ) and National Institute of Diabetes, and Digestive and Kidney Diseases ( DK 080459 ).
PY - 2012/6/15
Y1 - 2012/6/15
N2 - We have reported that, in addition to recapitulating the classical human Gaucher disease (GD1) phenotype, deletion of the glucocerebrosidase (GBA1) gene in mice results in the dysfunction of a diverse population of immune cells. Most of immune-related, non-classical features of GD1, including gammopathies and autoimmune diathesis, are resistant to macrophage-directed therapies. This has prompted a search for newer agents for human GD1. Here, we used high-density microarray on splenic and liver cells from affected GBA1 -/- mice to establish a gene " signature" , which was then utilized to interrogate the Broad Institute database, CMAP. Computational connectivity mapping of disease and drug pairs through CMAP revealed several highly enriched, non-null, mimic and anti-mimic hits. Most notably, two compounds with anti-helminthic properties, namely albendazole and oxamniquine, were identified; these are particularly relevant for future testing as the expression of chitinases is enhanced in GD1.
AB - We have reported that, in addition to recapitulating the classical human Gaucher disease (GD1) phenotype, deletion of the glucocerebrosidase (GBA1) gene in mice results in the dysfunction of a diverse population of immune cells. Most of immune-related, non-classical features of GD1, including gammopathies and autoimmune diathesis, are resistant to macrophage-directed therapies. This has prompted a search for newer agents for human GD1. Here, we used high-density microarray on splenic and liver cells from affected GBA1 -/- mice to establish a gene " signature" , which was then utilized to interrogate the Broad Institute database, CMAP. Computational connectivity mapping of disease and drug pairs through CMAP revealed several highly enriched, non-null, mimic and anti-mimic hits. Most notably, two compounds with anti-helminthic properties, namely albendazole and oxamniquine, were identified; these are particularly relevant for future testing as the expression of chitinases is enhanced in GD1.
KW - Connectivity mapping
KW - GBA1
KW - GD1
KW - Gaucher disease
KW - Microarray profiling
KW - Pathway analysis
UR - http://www.scopus.com/inward/record.url?scp=84862301385&partnerID=8YFLogxK
U2 - 10.1016/j.bbrc.2012.05.027
DO - 10.1016/j.bbrc.2012.05.027
M3 - Article
C2 - 22588172
AN - SCOPUS:84862301385
SN - 0006-291X
VL - 422
SP - 573
EP - 577
JO - Biochemical and Biophysical Research Communications
JF - Biochemical and Biophysical Research Communications
IS - 4
ER -