Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016

Weihua Huang; Changhong Yin; Jian Zhuge; Taliya Farooq; Esther C. Yoon; Sheila M. Nolan; Donald Chen; John T. Fallon; Guiqing Wang

doi:10.1128/genomeA.01394-16

Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016

Weihua Huang, Changhong Yin, Jian Zhuge, Taliya Farooq, Esther C. Yoon, Sheila M. Nolan, Donald Chen, John T. Fallon, Guiqing Wang

Research output: Contribution to journal › Article › peer-review

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Abstract

Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.

Original language	English
Article number	e0139416
Journal	Genome Announcements
Volume	4
Issue number	6
DOIs	https://doi.org/10.1128/genomeA.01394-16
State	Published - 2016
Externally published	Yes

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title = "Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016",

abstract = "Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.",

author = "Weihua Huang and Changhong Yin and Jian Zhuge and Taliya Farooq and Yoon, {Esther C.} and Nolan, {Sheila M.} and Donald Chen and Fallon, {John T.} and Guiqing Wang",

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AU - Huang, Weihua

AU - Yin, Changhong

AU - Zhuge, Jian

AU - Farooq, Taliya

AU - Yoon, Esther C.

AU - Nolan, Sheila M.

AU - Chen, Donald

AU - Fallon, John T.

AU - Wang, Guiqing

PY - 2016

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AB - Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.

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Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016

Abstract

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