Comparing microarray studies

Mayte Suárez-Fariñas; Marcelo O. Magnasco

doi:10.1385/1-59745-390-0:139

Comparing microarray studies

Mayte Suárez-Fariñas, Marcelo O. Magnasco

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

10 Scopus citations

Abstract

We present a practical guide to some of the issues involved in comparing or integrating different microarray studies. We discuss the influence that various factors have on the agreement between studies, such as different technologies and platforms, statistical analysis criteria, protocols, and lab variability. We discuss methods to carry out or refine such comparisons, and detail several, common pitfalls to avoid. Finally, we illustrate these ideas with an example case.

Original language	English
Title of host publication	Microarray Data Analysis
Subtitle of host publication	Methods and Applications
Editors	Michael J. Korenberg
Pages	139-152
Number of pages	14
DOIs	https://doi.org/10.1385/1-59745-390-0:139
State	Published - 24 Mar 2007

Publication series

Name	Methods in Molecular Biology
Volume	377
ISSN (Print)	1064-3745

Keywords

Crossplatform comparisons
Meta-analysis
Microarray

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10.1385/1-59745-390-0:139

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Comparing microarray studies

Abstract

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Keywords

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