Cleavage Under Targets & Release Using Nuclease (CUT&RUN) of Histone Modifications in Epidermal Stem Cells of Adult Murine Skin

Pooja Flora, Elena Ezhkova

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

Abstract

Cleavage Under Targets & Release Using Nuclease (CUT&RUN) has swiftly become the preferred procedure over the past few years for genomic mapping and detecting interactions between chromatin and its bound proteins. CUT&RUN is now being widely used for characterizing the epigenetic landscape in many cell types as it utilizes far less cell numbers when compared to Chromatin Immunoprecipitation-sequencing (ChIP-seq), thereby making it a powerful tool for researchers working with limited material. This protocol has been specifically optimized for detecting histone modifications in fluorescence-activated cell sorting (FACS)-isolated epidermal stem cells from adult mice.

Original languageEnglish
Title of host publicationMethods in Molecular Biology
PublisherHumana Press Inc.
Pages9-21
Number of pages13
DOIs
StatePublished - 2024

Publication series

NameMethods in Molecular Biology
Volume2736
ISSN (Print)1064-3745
ISSN (Electronic)1940-6029

Keywords

  • CUT&RUN
  • Epidermis
  • Epigenetics
  • Histone modifications
  • Stem cells

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