CGH data analysis

  • Adam A. Margolin
  • , Joel Greshock
  • , Barbara L. Weber

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

Abstract

Array comparative genomic hybridization (aCGH) is an emerging technology for measuring genome-wide DNA copy number. aCGH has been demonstrated as an effective tool in gene discovery and disease classification in cancer and other genetic disorders. This review describes recently employed analysis techniques for genomic copy number profiling using aCGH with a particular focus on how established gene expression array analysis techniques can be adapted for analysis of aCGH data. We intend this review to propose a framework to guide ongoing and future research in aCGH data analysis.

Original languageEnglish
Title of host publicationEncyclopedia of Genetics, Genomics, Proteomics and Bioinformatics
Subtitle of host publicationDunn/Genomics
Publisherwiley
Pages1-8
Number of pages8
ISBN (Electronic)9780470011539
ISBN (Print)9780470849743
DOIs
StatePublished - 1 Jan 2006
Externally publishedYes

Keywords

  • CGH
  • cancer
  • comparative genomic hybridization
  • data analysis
  • microarray

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