TY - JOUR
T1 - Artificial intelligence-derived neurofibrillary tangle burden is associated with antemortem cognitive impairment
AU - The PART working group
AU - Marx, Gabriel A.
AU - Koenigsberg, Daniel G.
AU - McKenzie, Andrew T.
AU - Kauffman, Justin
AU - Hanson, Russell W.
AU - Whitney, Kristen
AU - Signaevsky, Maxim
AU - Prastawa, Marcel
AU - Iida, Megan A.
AU - White, Charles L.
AU - Walker, Jamie M.
AU - Richardson, Timothy E.
AU - Koll, John
AU - Fernandez, Gerardo
AU - Zeineh, Jack
AU - Cordon-Cardo, Carlos
AU - Crary, John F.
AU - Farrell, Kurt
N1 - Funding Information:
We express our deepest gratitude to the patients and staff of the contributing centers and institutes. We acknowledge the following funding sources: NIH Grant Nos., R01AG054008, R01NS095252, R01AG060961, R01NS086736, P30AG066514, P50AG005138 R01AG062348, K01AG070326, Alzheimer’s Disease Research Center (ADRC) Developmental Project Funding Award P30 AG066514, the Winspear Family Center for Research on the Neuropathology of Alzheimer Disease, Rainwater Charitable Foundation, Genentech/Roche, Alexander Saint-Amand Fellowship, and a generous gift from Stuart Katz and Jane Martin. We acknowledge the following personnel Ping Shang, Jeff Harris, Nabil Tabish, Elena Baldwin, Natalia Han, and Chan Foong.
Publisher Copyright:
© 2022, The Author(s).
PY - 2022/12
Y1 - 2022/12
N2 - Tauopathies are a category of neurodegenerative diseases characterized by the presence of abnormal tau protein-containing neurofibrillary tangles (NFTs). NFTs are universally observed in aging, occurring with or without the concomitant accumulation of amyloid-beta peptide (Aβ) in plaques that typifies Alzheimer disease (AD), the most common tauopathy. Primary age-related tauopathy (PART) is an Aβ-independent process that affects the medial temporal lobe in both cognitively normal and impaired subjects. Determinants of symptomology in subjects with PART are poorly understood and require clinicopathologic correlation; however, classical approaches to staging tau pathology have limited quantitative reproducibility. As such, there is a critical need for unbiased methods to quantitatively analyze tau pathology on the histological level. Artificial intelligence (AI)-based convolutional neural networks (CNNs) generate highly accurate and precise computer vision assessments of digitized pathology slides, yielding novel histology metrics at scale. Here, we performed a retrospective autopsy study of a large cohort (n = 706) of human post-mortem brain tissues from normal and cognitively impaired elderly individuals with mild or no Aβ plaques (average age of death of 83.1 yr, range 55–110). We utilized a CNN trained to segment NFTs on hippocampus sections immunohistochemically stained with antisera recognizing abnormal hyperphosphorylated tau (p-tau), which yielded metrics of regional NFT counts, NFT positive pixel density, as well as a novel graph-theory based metric measuring the spatial distribution of NFTs. We found that several AI-derived NFT metrics significantly predicted the presence of cognitive impairment in both the hippocampus proper and entorhinal cortex (p < 0.0001). When controlling for age, AI-derived NFT counts still significantly predicted the presence of cognitive impairment (p = 0.04 in the entorhinal cortex; p = 0.04 overall). In contrast, Braak stage did not predict cognitive impairment in either age-adjusted or unadjusted models. These findings support the hypothesis that NFT burden correlates with cognitive impairment in PART. Furthermore, our analysis strongly suggests that AI-derived metrics of tau pathology provide a powerful tool that can deepen our understanding of the role of neurofibrillary degeneration in cognitive impairment.
AB - Tauopathies are a category of neurodegenerative diseases characterized by the presence of abnormal tau protein-containing neurofibrillary tangles (NFTs). NFTs are universally observed in aging, occurring with or without the concomitant accumulation of amyloid-beta peptide (Aβ) in plaques that typifies Alzheimer disease (AD), the most common tauopathy. Primary age-related tauopathy (PART) is an Aβ-independent process that affects the medial temporal lobe in both cognitively normal and impaired subjects. Determinants of symptomology in subjects with PART are poorly understood and require clinicopathologic correlation; however, classical approaches to staging tau pathology have limited quantitative reproducibility. As such, there is a critical need for unbiased methods to quantitatively analyze tau pathology on the histological level. Artificial intelligence (AI)-based convolutional neural networks (CNNs) generate highly accurate and precise computer vision assessments of digitized pathology slides, yielding novel histology metrics at scale. Here, we performed a retrospective autopsy study of a large cohort (n = 706) of human post-mortem brain tissues from normal and cognitively impaired elderly individuals with mild or no Aβ plaques (average age of death of 83.1 yr, range 55–110). We utilized a CNN trained to segment NFTs on hippocampus sections immunohistochemically stained with antisera recognizing abnormal hyperphosphorylated tau (p-tau), which yielded metrics of regional NFT counts, NFT positive pixel density, as well as a novel graph-theory based metric measuring the spatial distribution of NFTs. We found that several AI-derived NFT metrics significantly predicted the presence of cognitive impairment in both the hippocampus proper and entorhinal cortex (p < 0.0001). When controlling for age, AI-derived NFT counts still significantly predicted the presence of cognitive impairment (p = 0.04 in the entorhinal cortex; p = 0.04 overall). In contrast, Braak stage did not predict cognitive impairment in either age-adjusted or unadjusted models. These findings support the hypothesis that NFT burden correlates with cognitive impairment in PART. Furthermore, our analysis strongly suggests that AI-derived metrics of tau pathology provide a powerful tool that can deepen our understanding of the role of neurofibrillary degeneration in cognitive impairment.
KW - Alzheimer’s disease
KW - Computer vision
KW - Convolutional neural network
KW - Deep learning
KW - Digital pathology
KW - Neurofibrillary tangle
KW - Primary age-related tauopathy
KW - Tauopathy
UR - http://www.scopus.com/inward/record.url?scp=85140940417&partnerID=8YFLogxK
U2 - 10.1186/s40478-022-01457-x
DO - 10.1186/s40478-022-01457-x
M3 - Article
C2 - 36316708
AN - SCOPUS:85140940417
SN - 2051-5960
VL - 10
JO - Acta neuropathologica communications
JF - Acta neuropathologica communications
IS - 1
M1 - 157
ER -