TY - JOUR
T1 - Advances in the computational landscape for repurposed drugs against COVID-19
AU - Aronskyy, Illya
AU - Masoudi-Sobhanzadeh, Yosef
AU - Cappuccio, Antonio
AU - Zaslavsky, Elena
N1 - Publisher Copyright:
© 2021 Elsevier Ltd
PY - 2021/12
Y1 - 2021/12
N2 - The COVID-19 pandemic has caused millions of deaths and massive societal distress worldwide. Therapeutic solutions are urgently needed, but de novo drug development remains a lengthy process. One promising alternative is computational drug repurposing, which enables the prioritization of existing compounds through fast in silico analyses. Recent efforts based on molecular docking, machine learning, and network analysis have produced actionable predictions. Some predicted drugs, targeting viral proteins and pathological host pathways are undergoing clinical trials. Here, we review this work, highlight drugs with high predicted efficacy and classify their mechanisms of action. We discuss the strengths and limitations of the published methodologies and outline possible future directions. Finally, we curate a list of COVID-19 data portals and other repositories that could be used to accelerate future research.
AB - The COVID-19 pandemic has caused millions of deaths and massive societal distress worldwide. Therapeutic solutions are urgently needed, but de novo drug development remains a lengthy process. One promising alternative is computational drug repurposing, which enables the prioritization of existing compounds through fast in silico analyses. Recent efforts based on molecular docking, machine learning, and network analysis have produced actionable predictions. Some predicted drugs, targeting viral proteins and pathological host pathways are undergoing clinical trials. Here, we review this work, highlight drugs with high predicted efficacy and classify their mechanisms of action. We discuss the strengths and limitations of the published methodologies and outline possible future directions. Finally, we curate a list of COVID-19 data portals and other repositories that could be used to accelerate future research.
KW - COVID-19
KW - Computational drug repurposing
KW - Docking and molecular dynamics
KW - SARS-CoV-2
KW - Structure-guided machine learning
KW - Virus–host interaction network analysis
UR - http://www.scopus.com/inward/record.url?scp=85115168852&partnerID=8YFLogxK
U2 - 10.1016/j.drudis.2021.07.026
DO - 10.1016/j.drudis.2021.07.026
M3 - Review article
C2 - 34339864
AN - SCOPUS:85115168852
SN - 1359-6446
VL - 26
SP - 2800
EP - 2815
JO - Drug Discovery Today
JF - Drug Discovery Today
IS - 12
ER -