Yading Yuan

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Yading Yuan

PhD

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20152023

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ASSISTANT PROFESSOR | Radiation Oncology

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  • Author Correction: Federated learning enables big data for rare cancer boundary detection (Nature Communications, (2022), 13, 1, (7346), 10.1038/s41467-022-33407-5)

    Pati, S., Baid, U., Edwards, B., Sheller, M., Wang, S. H., Reina, G. A., Foley, P., Gruzdev, A., Karkada, D., Davatzikos, C., Sako, C., Ghodasara, S., Bilello, M., Mohan, S., Vollmuth, P., Brugnara, G., Preetha, C. J., Sahm, F., Maier-Hein, K., Zenk, M., & 259 othersBendszus, M., Wick, W., Calabrese, E., Rudie, J., Villanueva-Meyer, J., Cha, S., Ingalhalikar, M., Jadhav, M., Pandey, U., Saini, J., Garrett, J., Larson, M., Jeraj, R., Currie, S., Frood, R., Fatania, K., Huang, R. Y., Chang, K., Balaña, C., Capellades, J., Puig, J., Trenkler, J., Pichler, J., Necker, G., Haunschmidt, A., Meckel, S., Shukla, G., Liem, S., Alexander, G. S., Lombardo, J., Palmer, J. D., Flanders, A. E., Dicker, A. P., Sair, H. I., Jones, C. K., Venkataraman, A., Jiang, M., So, T. Y., Chen, C., Heng, P. A., Dou, Q., Kozubek, M., Lux, F., Michálek, J., Matula, P., Keřkovský, M., Kopřivová, T., Dostál, M., Vybíhal, V., Vogelbaum, M. A., Mitchell, J. R., Farinhas, J., Maldjian, J. A., Yogananda, C. G. B., Pinho, M. C., Reddy, D., Holcomb, J., Wagner, B. C., Ellingson, B. M., Cloughesy, T. F., Raymond, C., Oughourlian, T., Hagiwara, A., Wang, C., To, M. S., Bhardwaj, S., Chong, C., Agzarian, M., Falcão, A. X., Martins, S. B., Teixeira, B. C. A., Sprenger, F., Menotti, D., Lucio, D. R., LaMontagne, P., Marcus, D., Wiestler, B., Kofler, F., Ezhov, I., Metz, M., Jain, R., Lee, M., Lui, Y. W., McKinley, R., Slotboom, J., Radojewski, P., Meier, R., Wiest, R., Murcia, D., Fu, E., Haas, R., Thompson, J., Ormond, D. R., Badve, C., Sloan, A. E., Vadmal, V., Waite, K., Colen, R. R., Pei, L., Ak, M., Srinivasan, A., Bapuraj, J. R., Rao, A., Wang, N., Yoshiaki, O., Moritani, T., Turk, S., Lee, J., Prabhudesai, S., Morón, F., Mandel, J., Kamnitsas, K., Glocker, B., Dixon, L. V. M., Williams, M., Zampakis, P., Panagiotopoulos, V., Tsiganos, P., Alexiou, S., Haliassos, I., Zacharaki, E. I., Moustakas, K., Kalogeropoulou, C., Kardamakis, D. M., Choi, Y. S., Lee, S. K., Chang, J. H., Ahn, S. S., Luo, B., Poisson, L., Wen, N., Tiwari, P., Verma, R., Bareja, R., Yadav, I., Chen, J., Kumar, N., Smits, M., van der Voort, S. R., Alafandi, A., Incekara, F., Wijnenga, M. M. J., Kapsas, G., Gahrmann, R., Schouten, J. W., Dubbink, H. J., Vincent, A. J. P. E., van den Bent, M. J., French, P. J., Klein, S., Yuan, Y., Sharma, S., Tseng, T. C., Adabi, S., Niclou, S. P., Keunen, O., Hau, A. C., Vallières, M., Fortin, D., Lepage, M., Landman, B., Ramadass, K., Xu, K., Chotai, S., Chambless, L. B., Mistry, A., Thompson, R. C., Gusev, Y., Bhuvaneshwar, K., Sayah, A., Bencheqroun, C., Belouali, A., Madhavan, S., Booth, T. C., Chelliah, A., Modat, M., Shuaib, H., Dragos, C., Abayazeed, A., Kolodziej, K., Hill, M., Abbassy, A., Gamal, S., Mekhaimar, M., Qayati, M., Reyes, M., Park, J. E., Yun, J., Kim, H. S., Mahajan, A., Muzi, M., Benson, S., Beets-Tan, R. G. H., Teuwen, J., Herrera-Trujillo, A., Trujillo, M., Escobar, W., Abello, A., Bernal, J., Gómez, J., Choi, J., Baek, S., Kim, Y., Ismael, H., Allen, B., Buatti, J. M., Kotrotsou, A., Li, H., Weiss, T., Weller, M., Bink, A., Pouymayou, B., Shaykh, H. F., Saltz, J., Prasanna, P., Shrestha, S., Mani, K. M., Payne, D., Kurc, T., Pelaez, E., Franco-Maldonado, H., Loayza, F., Quevedo, S., Guevara, P., Torche, E., Mendoza, C., Vera, F., Ríos, E., López, E., Velastin, S. A., Ogbole, G., Soneye, M., Oyekunle, D., Odafe-Oyibotha, O., Osobu, B., Shu’aibu, M., Dorcas, A., Dako, F., Simpson, A. L., Hamghalam, M., Peoples, J. J., Hu, R., Tran, A., Cutler, D., Moraes, F. Y., Boss, M. A., Gimpel, J., Veettil, D. K., Schmidt, K., Bialecki, B., Marella, S., Price, C., Cimino, L., Apgar, C., Shah, P., Menze, B., Barnholtz-Sloan, J. S., Martin, J. & Bakas, S., Dec 2023, In: Nature Communications. 14, 1, 436.

    Research output: Contribution to journal › Comment/debate

    Open Access

  • The Liver Tumor Segmentation Benchmark (LiTS)

    Bilic, P., Christ, P., Li, H. B., Vorontsov, E., Ben-Cohen, A., Kaissis, G., Szeskin, A., Jacobs, C., Mamani, G. E. H., Chartrand, G., Lohöfer, F., Holch, J. W., Sommer, W., Hofmann, F., Hostettler, A., Lev-Cohain, N., Drozdzal, M., Amitai, M. M., Vivanti, R., Sosna, J., & 89 othersEzhov, I., Sekuboyina, A., Navarro, F., Kofler, F., Paetzold, J. C., Shit, S., Hu, X., Lipková, J., Rempfler, M., Piraud, M., Kirschke, J., Wiestler, B., Zhang, Z., Hülsemeyer, C., Beetz, M., Ettlinger, F., Antonelli, M., Bae, W., Bellver, M., Bi, L., Chen, H., Chlebus, G., Dam, E. B., Dou, Q., Fu, C. W., Georgescu, B., Giró-i-Nieto, X., Gruen, F., Han, X., Heng, P. A., Hesser, J., Moltz, J. H., Igel, C., Isensee, F., Jäger, P., Jia, F., Kaluva, K. C., Khened, M., Kim, I., Kim, J. H., Kim, S., Kohl, S., Konopczynski, T., Kori, A., Krishnamurthi, G., Li, F., Li, H., Li, J., Li, X., Lowengrub, J., Ma, J., Maier-Hein, K., Maninis, K. K., Meine, H., Merhof, D., Pai, A., Perslev, M., Petersen, J., Pont-Tuset, J., Qi, J., Qi, X., Rippel, O., Roth, K., Sarasua, I., Schenk, A., Shen, Z., Torres, J., Wachinger, C., Wang, C., Weninger, L., Wu, J., Xu, D., Yang, X., Yu, S. C. H., Yuan, Y., Yue, M., Zhang, L., Cardoso, J., Bakas, S., Braren, R., Heinemann, V., Pal, C., Tang, A., Kadoury, S., Soler, L., van Ginneken, B., Greenspan, H., Joskowicz, L. & Menze, B., Feb 2023, In: Medical Image Analysis. 84, 102680.

    Research output: Contribution to journal › Short survey › peer-review

    Open Access
    45 Scopus citations

  • Automatic Head and Neck Tumor Segmentation and Progression Free Survival Analysis on PET/CT Images

    Yuan, Y., Adabi, S. & Wang, X., 2022, Head and Neck Tumor Segmentation and Outcome Prediction - 2nd Challenge, HECKTOR 2021, Held in Conjunction with MICCAI 2021, Proceedings. Andrearczyk, V., Oreiller, V., Hatt, M. & Depeursinge, A. (eds.). Springer Science and Business Media Deutschland GmbH, p. 179-188 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13209 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Evaluating Scale Attention Network for Automatic Brain Tumor Segmentation with Large Multi-parametric MRI Database

    Yuan, Y., 2022, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 7th International Workshop, BrainLes 2021, Held in Conjunction with MICCAI 2021, Revised Selected Papers. Crimi, A. & Bakas, S. (eds.). Springer Science and Business Media Deutschland GmbH, p. 42-53 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12963 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Federated learning enables big data for rare cancer boundary detection

    Pati, S., Baid, U., Edwards, B., Sheller, M., Wang, S. H., Reina, G. A., Foley, P., Gruzdev, A., Karkada, D., Davatzikos, C., Sako, C., Ghodasara, S., Bilello, M., Mohan, S., Vollmuth, P., Brugnara, G., Preetha, C. J., Sahm, F., Maier-Hein, K., Zenk, M., & 259 othersBendszus, M., Wick, W., Calabrese, E., Rudie, J., Villanueva-Meyer, J., Cha, S., Ingalhalikar, M., Jadhav, M., Pandey, U., Saini, J., Garrett, J., Larson, M., Jeraj, R., Currie, S., Frood, R., Fatania, K., Huang, R. Y., Chang, K., Quintero, C. B., Capellades, J., Puig, J., Trenkler, J., Pichler, J., Necker, G., Haunschmidt, A., Meckel, S., Shukla, G., Liem, S., Alexander, G. S., Lombardo, J., Palmer, J. D., Flanders, A. E., Dicker, A. P., Sair, H. I., Jones, C. K., Venkataraman, A., Jiang, M., So, T. Y., Chen, C., Heng, P. A., Dou, Q., Kozubek, M., Lux, F., Michálek, J., Matula, P., Keřkovský, M., Kopřivová, T., Dostál, M., Vybíhal, V., Vogelbaum, M. A., Mitchell, J. R., Farinhas, J., Maldjian, J. A., Yogananda, C. G. B., Pinho, M. C., Reddy, D., Holcomb, J., Wagner, B. C., Ellingson, B. M., Cloughesy, T. F., Raymond, C., Oughourlian, T., Hagiwara, A., Wang, C., To, M. S., Bhardwaj, S., Chong, C., Agzarian, M., Falcão, A. X., Martins, S. B., Teixeira, B. C. A., Sprenger, F., Menotti, D., Lucio, D. R., LaMontagne, P., Marcus, D., Wiestler, B., Kofler, F., Ezhov, I., Metz, M., Jain, R., Lee, M., Lui, Y. W., McKinley, R., Slotboom, J., Radojewski, P., Meier, R., Wiest, R., Murcia, D., Fu, E., Haas, R., Thompson, J., Ormond, D. R., Badve, C., Sloan, A. E., Vadmal, V., Waite, K., Colen, R. R., Pei, L., Ak, M., Srinivasan, A., Bapuraj, J. R., Rao, A., Wang, N., Yoshiaki, O., Moritani, T., Turk, S., Lee, J., Prabhudesai, S., Morón, F., Mandel, J., Kamnitsas, K., Glocker, B., Dixon, L. V. M., Williams, M., Zampakis, P., Panagiotopoulos, V., Tsiganos, P., Alexiou, S., Haliassos, I., Zacharaki, E. I., Moustakas, K., Kalogeropoulou, C., Kardamakis, D. M., Choi, Y. S., Lee, S. K., Chang, J. H., Ahn, S. S., Luo, B., Poisson, L., Wen, N., Tiwari, P., Verma, R., Bareja, R., Yadav, I., Chen, J., Kumar, N., Smits, M., van der Voort, S. R., Alafandi, A., Incekara, F., Wijnenga, M. M. J., Kapsas, G., Gahrmann, R., Schouten, J. W., Dubbink, H. J., Vincent, A. J. P. E., van den Bent, M. J., French, P. J., Klein, S., Yuan, Y., Sharma, S., Tseng, T. C., Adabi, S., Niclou, S. P., Keunen, O., Hau, A. C., Vallières, M., Fortin, D., Lepage, M., Landman, B., Ramadass, K., Xu, K., Chotai, S., Chambless, L. B., Mistry, A., Thompson, R. C., Gusev, Y., Bhuvaneshwar, K., Sayah, A., Bencheqroun, C., Belouali, A., Madhavan, S., Booth, T. C., Chelliah, A., Modat, M., Shuaib, H., Dragos, C., Abayazeed, A., Kolodziej, K., Hill, M., Abbassy, A., Gamal, S., Mekhaimar, M., Qayati, M., Reyes, M., Park, J. E., Yun, J., Kim, H. S., Mahajan, A., Muzi, M., Benson, S., Beets-Tan, R. G. H., Teuwen, J., Herrera-Trujillo, A., Trujillo, M., Escobar, W., Abello, A., Bernal, J., Gómez, J., Choi, J., Baek, S., Kim, Y., Ismael, H., Allen, B., Buatti, J. M., Kotrotsou, A., Li, H., Weiss, T., Weller, M., Bink, A., Pouymayou, B., Shaykh, H. F., Saltz, J., Prasanna, P., Shrestha, S., Mani, K. M., Payne, D., Kurc, T., Pelaez, E., Franco-Maldonado, H., Loayza, F., Quevedo, S., Guevara, P., Torche, E., Mendoza, C., Vera, F., Ríos, E., López, E., Velastin, S. A., Ogbole, G., Soneye, M., Oyekunle, D., Odafe-Oyibotha, O., Osobu, B., Shu’aibu, M., Dorcas, A., Dako, F., Simpson, A. L., Hamghalam, M., Peoples, J. J., Hu, R., Tran, A., Cutler, D., Moraes, F. Y., Boss, M. A., Gimpel, J., Veettil, D. K., Schmidt, K., Bialecki, B., Marella, S., Price, C., Cimino, L., Apgar, C., Shah, P., Menze, B., Barnholtz-Sloan, J. S., Martin, J. & Bakas, S., Dec 2022, In: Nature Communications. 13, 1, 7346.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    24 Scopus citations
View all 17 Research outputs