Thomas Fuchs

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Thomas Fuchs

DrSc

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20052025

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  • 2020

    Deep Interactive Learning: An Efficient Labeling Approach for Deep Learning-Based Osteosarcoma Treatment Response Assessment

    Ho, D. J., Agaram, N. P., Schüffler, P. J., Vanderbilt, C. M., Jean, M. H., Hameed, M. R. & Fuchs, T. J., 2020, Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings. Martel, A. L., Abolmaesumi, P., Stoyanov, D., Mateus, D., Zuluaga, M. A., Zhou, S. K., Racoceanu, D. & Joskowicz, L. (eds.). Springer Science and Business Media Deutschland GmbH, p. 540-549 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12265 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    26 Scopus citations
  • 2019

    Unsupervised subtyping of cholangiocarcinoma using a deep clustering convolutional autoencoder

    Muhammad, H., Sigel, C. S., Campanella, G., Boerner, T., Pak, L. M., Büttner, S., IJzermans, J. N. M., Koerkamp, B. G., Doukas, M., Jarnagin, W. R., Simpson, A. L. & Fuchs, T. J., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P.-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer Science and Business Media Deutschland GmbH, p. 604-612 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11764 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    23 Scopus citations
  • 2018

    Survival modeling of pancreatic cancer with radiology using convolutional neural networks

    Muhammad, H., Häggström, I., Klimstra, D. S. & Fuchs, T. J., 2018, Simulation, Image Processing, and Ultrasound Systems for Assisted Diagnosis and Navigation - International Workshops, POCUS 2018, BIVPCS 2018, CuRIOUS 2018, and CPM 2018, Held in Conjunction with MICCAI 2018, Proceedings. Aylward, S., Simpson, A., Maier-Hein, L., Martel, A., Chabanas, M., Tavares, J. M., Reinertsen, I., Taylor, Z., Xiao, Y., Farahani, K., Stoyanov, D., Li, S. & Rivaz, H. (eds.). Springer Verlag, p. 187-192 6 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11042 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations
  • 2017

    DeepScope: Nonintrusive whole slide saliency annotation and prediction from pathologists at the microscope

    Schaumberg, A. J., Joseph Sirintrapun, S., Al-Ahmadie, H. A., Schüffler, P. J. & Fuchs, T. J., 2017, Computational Intelligence Methods for Bioinformatics and Biostatistics - 13th International Meeting, CIBB 2016, Revised Selected Papers. Caravagna, G., Tagliaferri, R., Gilbert, D. & Bracciali, A. (eds.). Springer Verlag, p. 42-58 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10477 LNBI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations
  • 2015

    Risk-aware planetary rover operation: Autonomous terrain classification and path planning

    Ono, M., Fuchs, T. J., Steffy, A., Maimone, M. & Yen, J., 5 Jun 2015, 2015 IEEE Aerospace Conference, AERO 2015. IEEE Computer Society, 7119022. (IEEE Aerospace Conference Proceedings; vol. 2015-June).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    98 Scopus citations

  • Robot-Centric Activity Prediction from First-Person Videos: What Will They Do to Me?

    Ryoo, M. S., Fuchs, T. J., Xia, L., Aggarwal, J. K. & Matthies, L., 2 Mar 2015, HRI 2015 - Proceedings of the 2015 ACM/IEEE International Conference on Human-Robot Interaction. IEEE Computer Society, p. 295-302 8 p. (ACM/IEEE International Conference on Human-Robot Interaction; vol. 2015-March).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    110 Scopus citations
  • 2014

    Automated real-time classification and decision making in massive data streams from synoptic sky surveys

    Djorgovski, S. G., Mahabal, A., Donalek, C., Graham, M., Drake, A., Turmon, M. & Fuchs, T., 2 Dec 2014, Proceedings - 2014 IEEE 10th International Conference on eScience, eScience 2014. Institute of Electrical and Electronics Engineers Inc., p. 204-211 8 p. 6972266. (Proceedings - 2014 IEEE 10th International Conference on eScience, eScience 2014; vol. 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    4 Scopus citations

  • Sparse meta-Gaussian information bottleneck

    Rey, M., Fuchs, T. J. & Roth, V., 2014, 31st International Conference on Machine Learning, ICML 2014. International Machine Learning Society (IMLS), p. 2538-2549 12 p. (31st International Conference on Machine Learning, ICML 2014; vol. 3).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations
  • 2013

    Feature selection strategies for classifying high dimensional astronomical data sets

    Donalek, C., Djorgovski, S. G., Mahabal, A. A., Graham, M. J., Drake, A. J., Kumar, A. A., Philip, N. S., Fuchs, T. J., Turmon, M. J., Yang, M. T. C. & Longo, G., 2013, Proceedings - 2013 IEEE International Conference on Big Data, Big Data 2013. IEEE Computer Society, p. 35-41 7 p. 6691731. (Proceedings - 2013 IEEE International Conference on Big Data, Big Data 2013).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    15 Scopus citations
  • 2012

    Combined shape, appearance and silhouette for simultaneous manipulator and object tracking

    Hebert, P., Hudson, N., Ma, J., Howard, T., Fuchs, T., Bajracharya, M. & Burdick, J., 1 May 2012, 2012 IEEE International Conference on Robotics and Automation, ICRA 2012. Institute of Electrical and Electronics Engineers Inc., p. 2405-2412 8 p. 6225084. (Proceedings - IEEE International Conference on Robotics and Automation).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    35 Scopus citations

  • End-to-end dexterous manipulation with deliberate interactive estimation

    Hudson, N., Howard, T., Ma, J., Jain, A., Bajracharya, M., Myint, S., Kuo, C., Matthies, L., Backes, P., Hebert, P., Fuchs, T. & Burdick, J., 1 May 2012, 2012 IEEE International Conference on Robotics and Automation, ICRA 2012. Institute of Electrical and Electronics Engineers Inc., p. 2371-2378 8 p. 6225101. (Proceedings - IEEE International Conference on Robotics and Automation).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    38 Scopus citations
  • 2010

    Computational TMA analysis and cell nucleus classification of renal cell carcinoma

    Schüffler, P. J., Fuchs, T. J., Ong, C. S., Roth, V. & Buhmann, J. M., 2010, Pattern Recognition - 32nd DAGM Symposium, Proceedings. p. 202-211 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6376 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    15 Scopus citations

  • Geometrical consistent 3D tracing of neuronal processes in ssTEM data

    Kaynig, V., Fuchs, T. J. & Buhmann, J. M., 2010, Medical Image Computing and Computer-Assisted Intervention, MICCAI2010 - 13th International Conference, Proceedings. PART 2 ed. p. 209-216 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6362 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    27 Scopus citations

  • Neuron geometry extraction by perceptual grouping in ssTEM images

    Kaynig, V., Fuchs, T. & Buhmann, J. M., 2010, 2010 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, CVPR 2010. p. 2902-2909 8 p. 5540029. (Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    79 Scopus citations

  • The translation-invariant Wishart-Dirichlet process for clustering distance data

    Vogt, J. E., Prabhakaran, S., Fuchs, T. J. & Roth, V., 2010, ICML 2010 - Proceedings, 27th International Conference on Machine Learning. p. 1111-1118 8 p. (ICML 2010 - Proceedings, 27th International Conference on Machine Learning).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    12 Scopus citations
  • 2009

    Graph-based pancreatic islet segmentation for early type 2 diabetes mellitus on histopathological tissue

    Floros, X., Fuchs, T. J., Rechsteiner, M. P., Spinas, G., Moch, H. & Buhmann, J. M., 2009, Medical Image Computing and Computer-Assisted Intervention - MICCAI2009 - 12th International Conference, Proceedings. PART 2 ed. p. 633-640 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5762 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    4 Scopus citations

  • Inter-active learning of randomized tree ensembles for object detection

    Fuchs, T. J. & Buhmann, J. M., 2009, 2009 IEEE 12th International Conference on Computer Vision Workshops, ICCV Workshops 2009. p. 1370-1377 8 p. 5457452. (2009 IEEE 12th International Conference on Computer Vision Workshops, ICCV Workshops 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Randomized tree ensembles for object detection in computational pathology

    Fuchs, T. J., Haybaeck, J., Wild, P. J., Heikenwalder, M., Moch, H., Aguzzi, A. & Buhmann, J. M., 2009, Advances in Visual Computing - 5th International Symposium, ISVC 2009, Proceedings. PART 1 ed. p. 367-378 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5875 LNCS, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • The bayesian group-lasso for analyzing contingency tables

    Raman, S., Fuchs, T. J., Wild, P. J., Dahl, E. & Roth, V., 2009, Proceedings of the 26th Annual International Conference on Machine Learning, ICML'09. 110. (ACM International Conference Proceeding Series; vol. 382).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    14 Scopus citations

  • The Bayesian Group-Lasso for analyzing contingency tables

    Raman, S., Fuchs, T. J., Wild, P. J., Dahl, E. & Roth, V., 2009, Proceedings of the 26th International Conference On Machine Learning, ICML 2009. p. 881-888 8 p. (Proceedings of the 26th International Conference On Machine Learning, ICML 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    52 Scopus citations
  • 2008

    Automatic and robust forearm segmentation using graph cuts

    Fürnstahl, P., Fuchs, T., Schweizer, A., Nagy, L., Sźekely, G. & Harders, M., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 77-80 4 p. 4540936. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    18 Scopus citations

  • Computational pathology analysis of tissue microarrays predicts survival of renal clear cell carcinoma patients

    Fuchs, T. J., Wild, P. J., Moch, H. & Buhmann, J. M., 2008, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008 - 11th International Conference, Proceedings. PART 2 ed. Springer Verlag, p. 1-8 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5242 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    55 Scopus citations

  • Weakly supervised cell nuclei detection and segmentation on tissue microarrays of renal clear cell carcinoma

    Fuchs, T. J., Lange, T., Wild, P. J., Moch, H. & Buhmann, J. M., 2008, Pattern Recognition - 30th DAGM Symposium, Proceedings. p. 173-182 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5096 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    15 Scopus citations