Research output per year
Research output per year
Personal profile
Headline
ASSISTANT PROFESSOR | Genetics and Genomic Sciences
Biography
I am an Assistant Professor in the Deparrtment of Genetics and Genomic Sciences. I received my Ph.D. in Statistics from University of California, Riverside. I joined the GGS Department at Sinai in 2018 as a Post-doctoral fellow. Since joining ISMMS, I have been actively involved in large scale cancer studies from NCI-CPTAC (Clinical Proteomic Tumor Analysis Consortium). Primarily my research is focused on developing novel computational/statistical methods for integrating different types of complex high-dimensional multimodal -omics data sets. Specifically, I develop novel algorithms for learning directed network based on high dimensional -omics data to facilitate system learning.
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Collaborations and top research areas from the last five years
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Erratum: Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer (Cell (2023) 186(16) (3476–3498.e35), (S0092867423007377), (10.1016/j.cell.2023.07.004))
Chowdhury, S., Kennedy, J. J., Ivey, R. G., Murillo, O. D., Hosseini, N., Song, X., Petralia, F., Calinawan, A., Savage, S. R., Berry, A. B., Reva, B., Ozbek, U., Krek, A., Ma, W., da Veiga Leprevost, F., Ji, J., Yoo, S., Lin, C., Voytovich, U. J. & Huang, Y. & 27 others, , 15 Feb 2024, In: Cell. 187, 4, p. 1016 1 p.Research output: Contribution to journal › Comment/debate
Open Access -
Pan-cancer proteogenomics characterization of tumor immunity
Clinical Proteomic Tumor Analysis Consortium, 29 Feb 2024, In: Cell. 187, 5, p. 1255-1277.e27Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
A more powerful test for three-arm non-inferiority via risk difference: Frequentist and Bayesian approaches
Paul, E., Tiwari, R. C., Chowdhury, S. & Ghosh, S., 2023, In: Journal of Applied Statistics. 50, 4, p. 848-870 23 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
A multiplexed assay for quantifying immunomodulatory proteins supports correlative studies in immunotherapy clinical trials
Whiteaker, J. R., Zhao, L., Schoenherr, R. M., Huang, D., Lundeen, R. A., Voytovich, U., Kennedy, J. J., Ivey, R. G., Lin, C., Murillo, O. D., Lorentzen, T. D., Colantonio, S., Caceres, T. W., Roberts, R. R., Knotts, J. G., Reading, J. J., Perry, C. D., Richardson, C. W., Garcia-Buntley, S. S. & Bocik, W. & 9 others, , 2023, In: Frontiers in Oncology. 13, 1168710.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Bayesian functional data analysis over dependent regions and its application for identification of differentially methylated regions
Chatterjee, S., Chowdhury, S., Ryu, D. & Basu, S., Dec 2023, In: Biometrics. 79, 4, p. 3294-3306 13 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations
Press/Media
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Findings from Icahn School of Medicine at Mount Sinai Reveals New Findings on Cancer (Pan-cancer Proteogenomics Characterization of Tumor Immunity)
Reva, B. A., Sebra, R., Wang, P., Song, X., Ma’ayan, A., Petralia, F. & Chowdhury, S.
4/06/24
1 item of Media coverage
Press/Media
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Mount Sinai Health System: Ovarian Cancer - New Biological Markers Found That May Predict Which Patients Won't Respond to Chemotherapy
Reva, B. A., Özbek, U., Wang, P., Song, X., Petralia, F. & Chowdhury, S.
3/08/23 → 4/08/23
2 items of Media coverage
Press/Media
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Ovarian Cancer: New Biological Markers Found That May Predict Which Patients Won't Respond to Chemotherapy.
Reva, B. A., Özbek, U., Wang, P., Song, X., Petralia, F. & Chowdhury, S.
3/08/23
1 item of Media coverage
Press/Media
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Ovarian Cancer: New Biological Markers Found That May Predict Which Patients Won't Respond to Chemotherapy
Reva, B. A., Özbek, U., Wang, P., Song, X., Petralia, F. & Chowdhury, S.
3/08/23
75 items of Media coverage
Press/Media