Sacha Gnjatic

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Sacha Gnjatic

PhD

Calculated based on number of publications stored in Pure and citations from Scopus
1995 …2025

Research activity per year

Search results

  • 2025

    Baseline colitogenicity and acute perturbations of gut microbiota in immunotherapy-related colitis

    Shang, J., Del Valle, D. M., Britton, G. J., Mead, K. R., Rajpal, U., Chen-Liaw, A., Mogno, I., Li, Z., Menon, R., Gonzalez-Kozlova, E., Elkrief, A., Peled, J. U., Gonsalves, T. R., Shah, N. J., Postow, M., Colombel, J. F., Gnjatic, S., Faleck, D. M. & Faith, J. J., 6 Jan 2025, In: Journal of Experimental Medicine. 222, 1, e20232079.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Immunological biomarkers of response and resistance to treatment with cabozantinib and nivolumab in recurrent endometrial cancer

    Roudko, V., Del Valle, D. M., Radkevich, E., Kelly, G., Hui, X., Patel, M., Gonzalez-Kozlova, E., Tuballes, K., Streicher, H., Atale, S., Wang, L., Czinczin, B., Kim-Schulze, S., Wistuba, I. I., Haymaker, C. L., Al-Atrash, G., Manyam, G., Zhang, J., Thompson, R. & Suarez-Farinas, M. & 2 others, Lheureux, S. & Gnjatic, S., 25 Feb 2025, In: Journal for ImmunoTherapy of Cancer. 13, 2, e010541.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Peripheral Transcriptomics in Acute and Long-Term Kidney Dysfunction in SARS-CoV2 Infection

    Jayaraman, P., Rajagopal, M., Paranjpe, I., Suarez-Farinas, M., Liharska, L., Thompson, R., Del Valle, D. M., Beckmann, N., Lund, A. N., Gownivaripally, P., Oh, W., Gulamali, F. F., Kauffman, J., Gonzalez-Kozlova, E., Dellepiane, S., Vasquez-Rios, G., Vaid, A., Jiang, J., Fox, B. & Sakhuja, A. & 12 others, Chen, S., Kenigsberg, E., He, J. C., Coca, S. G., Chan, L., Merad, M., Kim-Schulze, S., Gnjatic, S., Tsalik, E., Langley, R., Charney, A. W. & Nadkarni, G. N., 2025, (Accepted/In press) In: Kidney360. 10.34067/KID.0000000727.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • PhosNetVis: A web-based tool for fast kinase-substrate enrichment analysis and interactive 2D/3D network visualizations of phosphoproteomics data

    Rawal, O., Turhan, B., Peradejordi, I. F., Chandrasekar, S., Kalayci, S., Gnjatic, S., Johnson, J., Bouhaddou, M. & Gümüş, Z. H., 10 Jan 2025, In: Patterns. 6, 1, 101148.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Prediction of checkpoint inhibitor immunotherapy efficacy for cancer using routine blood tests and clinical data

    Yoo, S. K., Fitzgerald, C. W., Cho, B. A., Fitzgerald, B. G., Han, C., Koh, E. S., Pandey, A., Sfreddo, H., Crowley, F., Korostin, M. R., Debnath, N., Leyfman, Y., Valero, C., Lee, M., Vos, J. L., Lee, A. S., Zhao, K., Lam, S., Olumuyide, E. & Kuo, F. & 17 others, Wilson, E. A., Hamon, P., Hennequin, C., Saffern, M., Vuong, L., Hakimi, A. A., Brown, B., Merad, M., Gnjatic, S., Bhardwaj, N., Galsky, M. D., Schadt, E. E., Samstein, R. M., Marron, T. U., Gönen, M., Morris, L. G. T. & Chowell, D., Mar 2025, In: Nature Medicine. 31, 3, p. 869-880 12 p., 729.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations

  • Single-cell RNA sequencing-derived signatures define response patterns to atezolizumab + bevacizumab in advanced hepatocellular carcinoma

    Cappuyns, S., Piqué-Gili, M., Esteban-Fabró, R., Philips, G., Balaseviciute, U., Pinyol, R., Gris-Oliver, A., Vandecaveye, V., Abril-Fornaguera, J., Montironi, C., Bassaganyas, L., Peix, J., Zeitlhoefler, M., Mesropian, A., Huguet-Pradell, J., Haber, P. K., Figueiredo, I., Ioannou, G., Gonzalez-Kozlova, E. & D'Alessio, A. & 21 others, Mohr, R., Meyer, T., Lachenmayer, A., Marquardt, J. U., Reeves, H. L., Edeline, J., Finkelmeier, F., Trojan, J., Galle, P. R., Foerster, F., Mínguez, B., Montal, R., Gnjatic, S., Pinato, D. J., Heikenwalder, M., Verslype, C., Van Cutsem, E., Lambrechts, D., Villanueva, A., Dekervel, J. & Llovet, J. M., 2025, (Accepted/In press) In: Journal of Hepatology.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Society for Immunotherapy of Cancer: updates and best practices for multiplex immunohistochemistry (IHC) and immunofluorescence (IF) image analysis and data sharing

    Taube, J. M., Sunshine, J. C., Angelo, M., Akturk, G., Eminizer, M., Engle, L. L., Ferreira, C. S., Gnjatic, S., Green, B., Greenbaum, S., Greenwald, N. F., Hedvat, C. V., Hollmann, T. J., Jiménez-Sánchez, D., Korski, K., Lako, A., Parra, E. R., Rebelatto, M. C., Rimm, D. L. & Rodig, S. J. & 11 others, Rodriguez-Canales, J., Roskes, J. S., Schalper, K. A., Schenck, E., Steele, K. E., Surace, M. J., Szalay, A. S., Tetzlaff, M. T., Wistuba, I. I., Yearley, J. H. & Bifulco, C. B., 8 Jan 2025, In: Journal for ImmunoTherapy of Cancer. 13, 1, e008875.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    1 Scopus citations

  • Society for Immunotherapy of Cancer (SITC) consensus statement on essential biomarkers for immunotherapy clinical protocols

    Cottrell, T. R., Lotze, M. T., Ali, A., Bifulco, C. B., Capitini, C. M., Chow, L. Q. M., Cillo, A. R., Collyar, D., Cope, L., Deutsch, J. S., Dubrovsky, G., Gnjatic, S., Goh, D., Halabi, S., Kohanbash, G., Maecker, H. T., Maleki Vareki, S., Mullin, S., Seliger, B. & Taube, J. & 17 others, Vos, W., Yeong, J., Anderson, K. G., Bruno, T. C., Chiuzan, C., Diaz-Padilla, I., Garrett-Mayer, E., Glitza Oliva, I. C., Grandi, P., Hill, E. G., Hobbs, B. P., Najjar, Y. G., Pettit Nassi, P., Simons, V. H., Subudhi, S. K., Sullivan, R. J. & Takimoto, C. H., 7 Mar 2025, In: Journal for ImmunoTherapy of Cancer. 13, 3, e010928.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • The Society for Immunotherapy of Cancer Perspective on Tissue-Based Technologies for Immuno-Oncology Biomarker Discovery and Application

    Monette, A., Aguilar-Mahecha, A., Altinmakas, E., Angelos, M. G., Assad, N., Batist, G., Bommareddy, P. K., Bonilla, D. L., Borchers, C. H., Church, S. E., Ciliberto, G., Cogdill, A. P., Fattore, L., Hacohen, N., Haris, M., Lacasse, V., Lie, W. R., Mehta, A., Ruella, M. & Sater, H. A. & 7 others, Spatz, A., Taouli, B., Tarhoni, I., Gonzalez-Kozlova, E., Tirosh, I., Wang, X. & Gnjatic, S., 1 Feb 2025, In: Clinical Cancer Research. 31, 3, p. 439-456 18 p.

    Research output: Contribution to journal › Review article › peer-review

    1 Scopus citations
  • 2024

    An IL-4 signalling axis in bone marrow drives pro-tumorigenic myelopoiesis

    LaMarche, N. M., Hegde, S., Park, M. D., Maier, B. B., Troncoso, L., Le Berichel, J., Hamon, P., Belabed, M., Mattiuz, R., Hennequin, C., Chin, T., Reid, A. M., Reyes-Torres, I., Nemeth, E., Zhang, R., Olson, O. C., Doroshow, D. B., Rohs, N. C., Gomez, J. E. & Veluswamy, R. & 18 others, Hall, N., Venturini, N., Ginhoux, F., Liu, Z., Buckup, M., Figueiredo, I., Roudko, V., Miyake, K., Karasuyama, H., Gonzalez-Kozlova, E., Gnjatic, S., Passegué, E., Kim-Schulze, S., Brown, B. D., Hirsch, F. R., Kim, B. S., Marron, T. U. & Merad, M., 4 Jan 2024, In: Nature. 625, 7993, p. 166-174 9 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    67 Scopus citations

  • Author Correction: Gemcitabine and cisplatin plus nivolumab as organ-sparing treatment for muscle-invasive bladder cancer: a phase 2 trial(Nature Medicine, 10.1038/s41591-023-02568-1)

    Galsky, M. D., Daneshmand, S., Izadmehr, S., Gonzalez-Kozlova, E., Chan, K. G., Lewis, S., Achkar, B. E., Dorff, T. B., Cetnar, J. P., Neil, B. O., D’Souza, A., Mamtani, R., Kyriakopoulos, C., Jun, T., Gogerly-Moragoda, M., Brody, R., Xie, H., Nie, K., Kelly, G. & Horowitz, A. & 20 others, Kinoshita, Y., Ellis, E., Nose, Y., Ioannou, G., Cabal, R., Del Valle, D. M., Haines, G. K., Wang, L., Mouw, K. W., Samstein, R. M., Mehrazin, R., Bhardwaj, N., Yu, M., Zhao, Q., Kim-Schulze, S., Sebra, R., Zhu, J., Gnjatic, S., Sfakianos, J. & Pal, S. K., Apr 2024, In: Nature Medicine. 30, 4, p. 1211 1 p.

    Research output: Contribution to journal › Comment/debate

    Open Access
    1 Scopus citations

  • Extracellular vesicles, RNA sequencing, and bioinformatic analyses: Challenges, solutions, and recommendations

    Miceli, R. T., Chen, T. Y., Nose, Y., Tichkule, S., Brown, B., Fullard, J. F., Saulsbury, M. D., Heyliger, S. O., Gnjatic, S., Kyprianou, N., Cordon-Cardo, C., Sahoo, S., Taioli, E., Roussos, P., Stolovitzky, G., Gonzalez-Kozlova, E. & Dogra, N., Dec 2024, In: Journal of Extracellular Vesicles. 13, 12, e70005.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    14 Scopus citations

  • Gastrointestinal germinal center B cell depletion and reduction in IgA+ plasma cells in HIV-1 infection

    Cossarini, F., Shang, J., Krek, A., Al-Taie, Z., Hou, R., Canales-Herrerias, P., Tokuyama, M., Tankelevich, M., Tillowitz, A., Jha, D., Livanos, A. E., Leyre, L., Uzzan, M., Martinez-Delgado, G., Taylor, M. D., Sharma, K., Bourgonje, A. R., Cruz, M., Ioannou, G. & Dawson, T. & 15 others, D'Souza, D., Kim-Schulze, S., Akm, A., Aberg, J. A., Chen, B. K., Kwon, D. S., Gnjatic, S., Polydorides, A. D., Cerutti, A., Argmann, C., Vujkovic-Cvijin, I., Suarez-Fariñas, M., Petralia, F., Faith, J. J. & Mehandru, S., Oct 2024, In: Science immunology. 9, 100, eado0090.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations

  • Image-based multiplex immune profiling of cancer tissues: translational implications. A report of the International Immuno-oncology Biomarker Working Group on Breast Cancer

    Jahangir, C. A., Page, D. B., Broeckx, G., Gonzalez, C. A., Burke, C., Murphy, C., Reis-Filho, J. S., Ly, A., Harms, P. W., Gupta, R. R., Vieth, M., Hida, A. I., Kahila, M., Kos, Z., van Diest, P. J., Verbandt, S., Thagaard, J., Khiroya, R., Abduljabbar, K. & Acosta Haab, G. & 117 others, Acs, B., Adams, S., Almeida, J. S., Alvarado-Cabrero, I., Azmoudeh-Ardalan, F., Badve, S., Baharun, N. B., Bellolio, E. R., Bheemaraju, V., Blenman, K. R. M., Botinelly Mendonça Fujimoto, L., Burgues, O., Chardas, A., Cheang, M. C. U., Ciompi, F., Cooper, L. A. D., Coosemans, A., Corredor, G., Dantas Portela, F. L., Deman, F., Demaria, S., Dudgeon, S. N., Elghazawy, M., Fernandez-Martín, C., Fineberg, S., Fox, S. B., Giltnane, J. M., Gnjatic, S., Gonzalez-Ericsson, P. I., Grigoriadis, A., Halama, N., Hanna, M. G., Harbhajanka, A., Hart, S. N., Hartman, J., Hewitt, S., Horlings, H. M., Husain, Z., Irshad, S., Janssen, E. A. M., Kataoka, T. R., Kawaguchi, K., Khramtsov, A. I., Kiraz, U., Kirtani, P., Kodach, L. L., Korski, K., Akturk, G., Scott, E., Kovács, A., Lænkholm, A. V., Lang-Schwarz, C., Larsimont, D., Lennerz, J. K., Lerousseau, M., Li, X., Madabhushi, A., Maley, S. K., Manur Narasimhamurthy, V., Marks, D. K., McDonald, E. S., Mehrotra, R., Michiels, S., Kharidehal, D., Minhas, F. U. A. A., Mittal, S., Moore, D. A., Mushtaq, S., Nighat, H., Papathomas, T., Penault-Llorca, F., Perera, R. D., Pinard, C. J., Pinto-Cardenas, J. C., Pruneri, G., Pusztai, L., Rajpoot, N. M., Rapoport, B. L., Rau, T. T., Ribeiro, J. M., Rimm, D., Vincent-Salomon, A., Saltz, J., Sayed, S., Hytopoulos, E., Mahon, S., Siziopikou, K. P., Sotiriou, C., Stenzinger, A., Sughayer, M. A., Sur, D., Symmans, F., Tanaka, S., Taxter, T., Tejpar, S., Teuwen, J., Thompson, E. A., Tramm, T., Tran, W. T., van der Laak, J., Verghese, G. E., Viale, G., Wahab, N., Walter, T., Waumans, Y., Wen, H. Y., Yang, W., Yuan, Y., Bartlett, J., Loibl, S., Denkert, C., Savas, P., Loi, S., Specht Stovgaard, E., Salgado, R., Gallagher, W. M. & Rahman, A., Mar 2024, In: Journal of Pathology. 262, 3, p. 271-288 18 p.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    7 Scopus citations

  • Immune Assessment Today: Optimizing and Standardizing Efforts to Monitor Immune Responses in Cancer and Beyond

    Pandey, S., Cholak, M. E., Yadali, R., Sosman, J. A., Tetreault, M. P., Fang, D., Pollack, S. M., Gnjatic, S., Obeng, R. C., Lyerly, H. K., Sonabend, A. M., Guevara-Patiño, J. A., Butterfield, L. H., Zhang, B., Maecker, H. T. & Le Poole, I. C., Feb 2024, In: Cancers. 16, 3, 475.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Measurement of circulating viral antigens post-SARS-CoV-2 infection in a multicohort study

    Swank, Z., Borberg, E., Chen, Y., Senussi, Y., Chalise, S., Manickas-Hill, Z., Yu, X. G., Li, J. Z., Alter, G., Henrich, T. J., Kelly, J. D., Hoh, R., Goldberg, S. A., Deeks, S. G., Martin, J. N., Peluso, M. J., Talla, A., Li, X., Skene, P. & Bumol, T. F. & 1,255 others, Torgerson, T. R., Czartoski, J. L., McElrath, M. J., Karlson, E. W., Walt, D. R., Abraham, R., Ager, A., Aguilar, F. A., Ahmadi-Izad, G., Ahmed, D. R., Alvarez, A., Anderson, B., Asencios, W. D., Atha, M., Beaty, C. L., Bedi, B., Berry, J. A., Boone, D., Bower, M., Bremner, J. D., Brent, C., Brown-Smith, K. A., Bull, R., Bush, P. A., Capo, G., Carl-Igwe, K., Chitadze, C., Chukwumerije, N., Clyburn, E., Collins, S., Costello, J., Couture, G., Craft, A., Cribbs, S. K., Cui, X., Dandy, A., Rio, C. D., Jasarevic, R., Detelich, J. F., Dixon, C., Dow, J., Doyle, D. A., Elchommali, J., Ibeawuchi, C., Elsey, I., Fineman, R., Francis, A. G., Franks, N., Gallini, J., Gander, J. C., Gray, N., Grimes, A., Gutter, E., Han, J. E., Hang, T. P., Harding, J., Hernandez, L., Hewitt, L. N., Holloway, C., Hudgins, A. F., Huerta, C., Ifejika, C., Ingram, K. D., Javia, V. N., Jeter, M., Johnson, B., Joseph, Y., Juarez, M., Kajan, D., Khalil, L., Kirkpatrick, C. M., Kleinhenz, D., Kolailat, I., Koumanelis, A., Koumanelis, A., Kozoman, R., Krishnan, S., Lainez, J., Lawrence, B., Lee, M. A., Leon, J. D., Lew, V., Lewis, K. C., Litvack, M., Maroney, M., Maier, C. L., Makkaoui, N., Marconi, V. C., Martin, C. F., Martinez, M., Mbogo, L., McCaslin, A., McIntyre, J., Moanna, A., Montoya, M., Morales, E., Moran, C. A., Morgan-Billingslea, J., Murray, C., Nelson, R., Neuman, R. B., Nguyen, T., Ofotokun, I., Ojemakinde, E. I., Ojoawo, B., Osinski, E., Oviedo, S., Panganiban, B., Paredes-Gaitan, Y., Patzer, R. E., Pemu, P., Prude, M., Rahman, K., Ramakrishnan, G., Rebolledo, P. A., Roberts, M., Robinson, K., Rogers, C., Rouphael, N. G., Searles, C., Shah, A., Segall, M., Shaw, R. M., Silva, R., Simpson, C., Simpson-Derrell, K., Sirajud-Deen, T., Smith, V. E., Stringer, A., Stroud, J., Suthar, M. S., Sylber, C., Sylvera, A., Tanner, T., Teunis, L. J., Tolbert, M., Thomas, K. M., Thompson, S. G., Titanji, K., Toy, C., Traenkner, J., Truong, A., Unterberger, K., Vaccarino, V., Varney, K., Vyas, K., Vyas, K., Walker, T. A., Walkow, M., Wang, D., Wesley, T., Wiley, Z., Wimberly, E., Winston, J. R., Winter, T. J., Wongtrakool, C., Aikawa, M., Alba, G. A., Aung, T. N., Baden, L., Baslet, G., Bassett, I. V., Bennett, L., Bhattacharyya, S., Blazey-Martin, D., Buring, J., Cagnina, R. E., Chen, L. Q., Clark, C. R., Cohen, P., Collier, A. R., Czeisler, C., Duffy, E., Estill, P., Fong, T., Gay, E., Ghamloush, M., Ginns, L. C., Haack, M., Haas, J., Hamburg, N., Hauser, K. S., John, J., Jordan, M., Juelg, B. D., Kanjilal, D. G., Kim, A. Y., Klerman, E. B., Kobayashi, M., Kogelman, L., Lamas, D., Levy, B. D., Levy-Carrick, N., Lewis, G., Maley, J. H., Manson, J. A., Marathe, J. G., Mullington, J. M., O'Connor, G. T., Ojikutu, B., Perlis, R., Quintana, Y., Redline, S., Remis, E. J., Rosand, J., Sesso, H. D., Shaughnessy, L., Shepherd, F. M., Solomon, S., Sparks, J. A., Spencer, L. L., Stephenson, K., Systrom, D., Thomas, R. J., Min Thu, P. P., Ticotsky, A., Torres, R., Wallace, Z. S., Walt, D., Ward, H. D., Washko, G., Whittelsey, M., Wiener, R., Williams, C. T., Xerras, D., Zhang, H., Zionts, D., Armstrong, D., Binkley, S. E., Blackwell, K., Brown, T., Carton, T. W., Causey, A., Cook, F., Daniel, C. L., Datri, P., Domingo, J., Donahue, C., Eady, M., Edberg, J., Erdmann, N., Fuloria, J., Garcia-McClaney, N., Garner, M., Gillespie, M., Gray, B., Hagensee, M., Hall, W., Hansel, J., Hart, C., Hebson, C. L., Hidalgo, B., Holtzapfel, K., Jinright, A., Judd, S. E., Kennedy, T., Kirkwood, L., Leggio, C., Levitan, E. B., Maier, M., McCormack, P., Miele, L., Mitchell, K., Montgomery, A., Peralta-Carcelen, M., Perkins, A., Pilco, J. P., Powell, L., Shevin, R., Skipworth, S., Spurgeon, L., Sutherland, E., Tita, A. T., Trauth, A., Trotter, S., Van Deerlin, A., Ware, G., Weiser, S., Wilson, R., Woodruff, D., Wu, J., Young, M., Alemu, M., Anderson, J., Ashktorab, H., Brim, H., Chang, L., Chauhan, M., Cho, S., Durrani, S., Gentil, M. P., Goodman, K., Laiyemo, A. O., Lanke, G., Lebron, R., Maheshwari, A., Mehari, A., Nezamloo, A., Ngwa, J., Njoku, N., Ok, J., Sherif, Z. A., Solemani, A., Thuluvath, P., To, C., Spikes, L. A., James, J. A., Luciano Roman, C. A., Chow, D. C., Marshall, G. D., Dickinson, J. D., Hoover, S. E., Warren, D. E., Emery, I. F., Sukhera, F. I., Rosen, C. J., Greenway, F. L., Hodder, S. L., Shikuma, C. M., VanWagoner, T. M., Bardes, J. M., Kirwan, J. P., Wood, J. P., Whiteheart, S. W., Shellito, J., Roelke, T., Black, L., Tjarks, B., Fonseca, V., Gupta, S., Longo, M., Yang, M., MarGangcuangco, L., Bengtson, C., Castro, M., Howard, T., Garvy, B., Simmons, C., Garla, V., Kuebler, J., Nandi, U., Vasey, A., Bogie, A., Scott, J., Frontera, S. P., Bagur, J. S., Dominique-Villanueva, D., Juskowich, J., Reece, R., Sarwari, A., Aponte-Soto, L., Adams, D., Baker, A., Barbera, S., Basu, S., Bleasdale, S., Bolliger, D., Boyd, A. D., Boyineni, J., Breiter, T., Brown, D., Buhimschi, I. A., Carrithers, M. D., Certa, M., Chalamalla, R., Chebrolu, P., Chestek, D., Chessier, E., Cook, J. A., Cranford, S., Curry, H. L., Darbar, D., Dasgupta, R., Blakley, F. D., DeLisa, J. A., Del Rios, M., Diaz, M. Z., Diviak, K. R., Dixon, J., Donlon, M. F., Donohue, S. E., Dworkin, M. S., Edmonds, S., Ellison, A., Everett, E., Flanigan, C., Freedman, M. B., Gale, L., Gerald, L. B., Giles, W. H., Gordon, H. S., Hafner, J., Hammad, B., Hanson, K. A., Harris, P. C., Hartwig, K., Hasek, S., Hasse, W., Hendrickson, M., Hobbs, B., Hryniewicka, M., Hammerl, S., Hutton, R., Ibanez, A. L., Illendula, S. D., Ismail, N., Jain, A., Jennette, K. J., Kadubek, G., Kent, D., Kotini-Shah, P., Kelly, S. W., Kent, D. A., Kim, K. S., Kindred, E., Klein, J. D., Krishnan, J. A., Large, L., Lash, J., Lin, J. Y., Lu, J., Mahamed, A. M., Maholovich, P., Malchenko, S., Martinez, M., Mauntel-Medici, C., Madineni, A., McCauley, M., Menchaca, M., Mermelstein, R., Moreno, D. J., Morrissy, L., Muramatsu, N., Musick, H., Noland, S., Norwick, L., Novak, R. M., Olds, L., Ortiz, M., Patel, K., Perez, N. L., Pliskin, N. H., Pope, S., Prabhakar, B. S., Prasad, B., Predki, B., Prendergast, H. M., Quigley, J. G., Ramchandran, R., Ramirez, A., Rappe, S., Rehman, J., Rolon, C., Rowley, M., Rudraraju, G., Rutherfoord, M., Sader, S. B., Sculley, J. A., Smith-Mack, J., Swearingen, P., Stewart de Ramirez, S. A., Sudhindra, P., Sun, J., Tartt, N., Terlinde, T., Thompson, T., Vanden Hoek, T. L., Kelly, S. W., Villanueva, L., Welter, H., Woolley, B., Yazici, C., Charney, A. W., Kovatch, P., Merad, M., Nadkarni, G. N., Wisnivesky, J. P., Aberg, J. A., Ascolillo, S., Assenso, E., Bagiella, E., Bartram, L., Becker, J., Beckmann, N. D., Bendl, A., Chen, B. K., Civil, A., Dhar, K., Evo-Ortega, L., Fierer, D., Gallagher, E. J., Garcia-Sastre, A., Gnjatic, S., Guliyeva, S., Harvey-Ingram, L., Herrera-Moreno, J., Hill, M., Horowitz, C. R., Jackson, R., Kastrat, D., Lala-Trindade, A., Lin, J., Macaluso, N., Marcon, K., Meyer, D., Morinigo, J., Natelson, B. H., Nussenzweig, M., Padua, T., Putrino, D., Quazi, N., Ramos, M., Richardson, L., Russo, S., Seifert, A. C., Serri, A., Walker, J., Yee, M., Adolphi, N. L., Alekhina, N., Archuleta, D. A., Barlocker, J., Bateman, L., Bradfute, S. B., Brito, R., Bryan, T. W., Buck, K. E., Davis, D., Deakyne Davies, S. J., Decker, L. A., Elifritz, J., Erlandson, K. M., Facelli, J. C., Fudge, H. Z., Tran, H., Pitch, C., Feuerriegel, E. M., Ford, I., Friedman, N. P., Garcia-Soberanez, N. D., Gardner, E. M., Stringham, C., Ling, L., Gebremariam, T. H., Gentry, F. D., Gouripeddi, R., Graham, P., Gronert, E. G., Harkins, M. S., Hawkins, K. L., Hess, R., Johnny, J. D., Johnson, B. M., Jolley, S. E., Lloyd, J., Ludwig, K. R., Martinez, N. I., McCandless, S. A., Montoya, L. A., Oakes, J. L., Parada, A. N., Quinn, D. K., Raissy, H., Ramos, A., Reid, K. M., Reusch, J. E., Sheehan, E. B., Sokol, R. J., Treacher, I. S., Trinity, J. D., Truong, D. T., West, S. C., Molden, J., Sharareh, N., Weaver, L. J., Spivak, A. M., Brown, J. P., Shah, K. S., Pace, L. A., Scholand, M. B., Velinder, M., Cortez, M., Morimoto, S. S., Vernon, S. D., Lu, Y., Owen, M., Hermansen, J. A., Lindsay, A. M., Donohue, D. K., Garg, L., Wodushek, T., Higgins, J., Lockie, T., Brightman, M., Thurman, B., Powell, J. M., Freston, D. C., Medina, J. C., Aguirre, B., Anderson, J., Bair, T., Bosh, L., Evans, L., Garrett, C., Harris, D., Herrera, K., Horne, B. D., Juan, J., Knight, S., Knowlton, K., Leither, L., Maestas, H., May, H. T., Najarian, G., Woller, S. C., Zubal, S., Jensen, M. M., Webb, T., Iverson, L., Ayache, M., Baloi, A., Barnboym, E., Boldt, N., Bukulmez, H., Chesnick, H., Conrad, A., Consolo, M., Curtis, L., D'anza, B., DiFrancesco, K., Edminston, M., Eteshola, E., Gallagher, M., Gibson, K. S., Gordesky, L., Greenwood, C., Haghiac, M., Harris, P., Hernandez, C., Iqbal, S., Kaelber, D. C., Kaufman, E. S., Kennedy, O., Labbato, D., Lengu, K., Levert, A., Levin, J., Lowenthal, R., Mackin, B., Malakooti, S. K., McComsey, G. A., Minium, J., Mouchati, C., Oleson, C., Pearman, A., Hershey, M., Rivera, A., Rodgers, M., Rodgers, T., Roy, A., Russ, K., Scott, S., Sheth, N., Singer, N. G., Smith, B., Smith, C., Stancin, T., Temple, D., Tribout, M., Weinberger, E., Zhang, D., Zisis, S. N., Atieh, O., Yendewa, G., Baissary, J., Pettinato, K. I., Lim, J., Jacob, J., Adams, C., Tejani, V., Algren, H. A., Alicic, R., Baxter, J., Brennan, C., Caudill, A., Chen, P., Chopra, T., Chu, H. Y., Del Alcazar, J., Duven, A. M., Edmark, R., Emerson, S., Goldman, J. D., Gutierrez, V., Hadlock, J., Harteloo, A., Heath, J. R., Hood, S., Jackman, S., Kaneko, J., Kemp, M., Kim, C., Kuykendall, K., Li, S., Logue, J. K., Magis, A. T., Manner, P., Mason, C., McCaffrey, K., McDonald, C., McDonald, D., Murray, K. M., Nackviseth, C., Nguyen, H., Parimon, T., Poussier, R., Rowen, L., Satira, R., Torbati, S., Tuttle, K. R., Wallick, J. A., Yuan, D., Watanabe, K., Wilcox, L. E., Contreras, F., Dahlke, L., Gudipudi, L., Modes, M., Muttera, N., Salinas, N., Tadeo, J., White, S., Alvarado, S., Anderson, R., Arellanes, A., Barajas, R. A., Chauhan, S. P., Clarke, G. D., Farner, C. E., Fischer, M. S., Goldberg, M. P., Hasbani, K., Hastings, G., Heard, P., Herrera, I., Infante, E., Johnson, H., Jones, J., Kellogg, D. L., Kraig, E., Longoria, L., Nambiar, A. M., Okafor, E., Paredes, C. C., Patterson, T. F., Patterson, J. E., Pinones, A., Potter, J. S., Reeves, W. B., Saade, G. R., Salehi, M., Scholler, I., Seshadri, S., Shah, D. P., Shah, P., Sharma, K., Sharma, K., Soileau, B., Solis, P., Stoebner, C., Sullivan, M., Taylor, B. S., Tragus, R., Tsevat, J., Verduzco-Gutierrez, M., Ahuja, N., Blish, C. A., Blomkalns, A. L., Bonilla, H., Brotherton, R., Clinton, K., Dingankar, V., Geng, L. N., Go, M., Haddad, F., Jagannathan, P., Jamero, C., Jee, K., Jia, X. K., Khurana, N., Kumar, A., Maldonado, Y., Miglis, M. G., O'Conor, E., Olszewski, K., Pathak, D., Quintero, O., Scott, J., Singh, U., Urdaneta, A. E., Utz, P. J., Varkey, M. R., Saperia, C., Autry, L., Bime, C., Borwege, S., Copeland, J., DiLise-Russo, M., Ernst, K. C., Esquivel, D. R., Fadden, S., Gomez, I., Grischo, G., Hansen, L., Harris, D. T., Harris, S., Hartley, W., Hernandez, M., Hillier, L., Hsu, H., Hughes, T., Ismail, H., Iusim, S., James, M., Kala, M., Karnafel, M., Kim, D., Knox, K. S., Koleski, A., LaFleur, B., Lambert, B., LaRue, S., Lee-Iannotti, J. K., Lieberman, D., Lutrick, K., Merchant, N., Morton, C., Mosier, J. M., Murthy, G., Nikolich, J. Z., Olorunnisola, T., Parthasarathy, S., Peralta, J., Pilling, W., Pogreba-Brown, K., Reiman, E. M., Rischard, F. P., Ryan, L. T., Smith, T., Snyder, M., Soto, F., Subbian, V., Suhr, K., Unzek, S., Vadovicky, S., Velarde, D., Veres, S., Wilson, C., Anderson, G., Anglin, K., Argueta, U., Asare, K., Buitrago, M., Chang Song, C., Clark, A., Conway, E., Del Castillo, N., Deswal, M., Durstenfeld, M. S., Eilkhani, E., Eun, A., Fehrman, E., Figueroa, T., Flores, D., Grebe, H., Hsue, P., Huang, B., Ibrahim, R., Kelly, J. D., Kerbleski, M., Kirtikar, R., Lew, M. T., Lombardo, J., Lopez, M., Luna, M., Marquez, C., Munter, S., Ngo, L., Pineda-Ramirez, J., Rhoads, K., Rodriguez, A., Romero, J., Ryder, D., So, M., Somsouk, M., Tai, V., Tran, B., Uy, J., Valdivieso, D., Verma, D., Williams, M., Zamora, A., Newman, L. T., Abella, J., Barnette, Q., Bevc, C., Beverly, J., Ceger, P., Croxford, J., Enger, M., Fain, K., Farris, T., Hanlon, S., Hines, D., Johnson-Lawrence, V., Jordan, K., Lefebvre, C., Linas, B., Luukinen, B., Mandal, M., McKoy, N. J., Nance, S., Pasquarelli, D., Quiner, C., Sembajwe, R., Shaw, G., Thornburg, V., Tosco, K., Wright, H., Gross, R. S., Hochman, J. S., Horwitz, L. I., Katz, S. D., Troxel, A. B., Adler, L., Akinbo, P., Almenana, R., Aschalew, M., Balick, L., Bello, O., Bhuiyan, S., Blachman, N., Branski, R., Briscoe, J., Brosnahan, S., Bueler, E., Burgos, Y., Caplin, N., Chaplin, D., Chen, Y., Cheng, S., Choe, P., Choi, J., Chung, A., Church, R., Cobos, S., Croft, N., Irving, A. C., Del Boccio, P., Díaz, I., Divers, J., Doshi, V., Dreyer, B., Ebel, S., Esquenazi-Karonika, S., Faustin, A., Febres, E., Fine, J., Fink, S., Freeland, C., Frontera, J., Gallagher, R., Gonzalez-Duarte, A., Gross, R., Hasson, D., Hill, S., Hochman, J., Horwitz, L., Hossain, J., Islam, S., Jean, C. S., Johnson, S., Kansal, N., Katz, S., Kenney, R., Kershner, T., Kewlani, D., Kwak, J., Lamendola-Essel, M. F., Laury, S., Laynor, G., Lei, L., Leon, T., Linton, J., Logan, M., Malik, N., Mamistvalova, L., Mandel, H., Maranga, G., Mattoo, A., Mei, T., Mendelsohn, A., Mercier, E., Vernetti, P. M., Miller, M., Mitchell, M., Moreira, A., Mudumbi, P. C., Nahin, E., Nair, N., Nekulak, J., Owens, K., Parent, B., Patibandla, N., Petrov, P., Postelnicu, R., Pratt, F., Randall, I., Rao, P., Rapkiewicz, A., Rizzo, J. R., Rosas, J., Rose, C., Saint-Jean, C., Santacatterina, M., Shah, B., Shaukat, A., Simon, N., Simsir, A., Stinson, M., Tang, W., Tatapudi, V., Thawani, S., Thomas, M., Thorpe, L., Tom, M. L., Treiha, E., Troxel, A., Truong, J., Udosen, M., Valencia, C., Velazquez-Perez, J., Vernetti, P. M., Vidal, C., Viswanathan, A., Willerford, A., Williams, N., Wong, C., Wood, M. J., Wuller, S., Yin, S. H., Young, C., Zaretsky, J., Zavlunova, S., Ahirwar, S., Ahmed, S., Ainsworth, L. L., Atchley-Challenner, R., Avilach, P., Balan, T. T., Benik, N., Benoit, B., Bind, M. A. C., Bonaventura, W. J., Boutin, N., Brion, B., Cagan, A., Cai, T., Cao, T., Castro, V. M., Cerretani, X. R., Chan, J. G., Cheng, D., Chibnik, L. B., Ciriello, M., Costenbader, K., Dimitrov, D. S., Estiri, H., Fayad, M., Feldman, C. H., Foulkes, A., Gainer, V., Ghosh, B., Gollub, R., Guan, Z., Harris, A., Helmer, K., Hendrix, A., Holzbach, A., Huang, W., Kaufman, D., Keogh, D., Kerr, J. D., Klann, J. G., Krishnamoorthy, A., Lasky-Su, J. A., Liao, K. P., MacFadden, D., Maram, A., Martel, M. W., Mendis, M., Metta, R., Monteiro, J., Morales, E., Morse, R. E., Murphy, S., Nazaire, M. D., Neils, G., Nguyen, A. N., Norman, J., Paik, H. H., Pant, D., Park, H. K., Rabideau, D. J., Reeder, H. T., Rossi-Roh, K., Santacroce, L. M., Schlepphorst, K., Schulte, C., Selvaggi, C. A., Shinnick, D. J., Simons, W., Simpson, L. A., St. Jean Flanders, M. L., Strasser, Z., Thakrar, M. R., Thaweethai, T., Thorn, M., Trewett, P., Van Fleet, D., Wagholikar, K. B., Wang, T. D., Wattanasin, N., Weber, G., Williams, M. A., Zhang, R. Z., Cicek, M., Chang, N., Wirkus, S., Zahnle, N., Flotte, T. J., Frisch, E., Boysen, E. M., Welch, G., Akintonwa, T., Blancero, F., Brown, H. E., Carmilani, M., Cerda, M., Clash, V. H., Copeland, D., Hall, Y., kevin kondo, K., Lerma, L., Lindsay, J., Marti, H., Maughan, C., Minor, T., Taylor, B., Vincent, H., Zissis, M., Anderson, B., Bardhan, S., Castro-Baucom, L., Chisolm, D., Corchado, C., Damian, A. J., Daniel, C., DasGupta, S., Dehority, W., Feldman, C., Fessel, J., Rosas, L. G., Horowitz, C., Khullar, D., Lopez, K., McDonald Pinkett, S., Myaskovsky, L., Regino, L., St John Thomas, G., Stewart de Ramirez, S., Vangeepuram, N., Walden, A., Williams, N., Yin, S., Burton, P., Catallozzi, M., Clark, C., Dworetzky, B., Edwards, B., Ferrer, R. L., Judd, S., Rothman, R., Wagner, L., Wallace, A., Adams, S., Aragon, L., Bander, B., Bishof, K., Brooks, G., Carignan, E., Coombs, K., Davis, H., Blakley, F. D., Diggs, M., Brown, H. E., Favors, U., Fields, W., Fisher, L., Fitzgerald, M., Gaffney, A., Witvliet, M. G., Garcia, R., Gustafson, T., Guthe, N., Holmes, V., Hornig, M., Hornig, M., Jefferson, W., Kochis, N., Kondo, K., Lam, J., Lawrence, F., Letts, R., Lewis, J., Lopez, S., Martinez, T., McCorkell, L., McGrath, R., Minor, T. T., Moore, C., Nguyen, K., Nichols, L., O'Brien, L., Olson, H., Peddie, A., Perlowski, A., Lorenzo, E. P., Prentiss, L., Raytselis, N., Rochez, N., Rockwell, M., Rutter, J., Seibert, E., Sekar, A., Smith, C., Stiles, L., Taylor, E., Thompson, J., Trapp, S., Valdiva, S., Wilensky, R., Williams, M., Dawson, K. W. & Wylam, A., Dec 2024, In: Clinical Microbiology and Infection. 30, 12, p. 1599-1605 7 p.

    Research output: Contribution to journal › Article › peer-review

    8 Scopus citations

  • Multi-omics Analysis Reveals Immune Features Associated with Immunotherapy Benefit in Patients with Squamous Cell Lung Cancer from Phase III Lung-MAP S1400I Trial

    Parra, E. R., Zhang, J., Duose, D. Y., Gonzalez-Kozlova, E., Redman, M. W., Chen, H., Manyam, G. C., Kumar, G., Zhang, J., Song, X., Lazcano, R., Marques-Piubelli, M. L., Laberiano-Fernandez, C., Rojas, F., Zhang, B., Taing, L., Jhaveri, A., Geisberg, J., Altreuter, J. & Michor, F. & 27 others, Provencher, J., Yu, J., Cerami, E., Moravec, R., Kannan, K., Luthra, R., Alatrash, G., Huang, H. H., Xie, H., Patel, M., Nie, K., Harris, J., Argueta, K., Lindsay, J., Biswas, R., Van Nostrand, S., Kim-Schulze, S., Gray, J. E., Herbst, R. S., Wistuba, I. I., Gettinger, S., Kelly, K., Bazhenova, L., Gnjatic, S., Lee, J. J., Zhang, J. & Haymaker, C., 15 Apr 2024, In: Clinical Cancer Research. 30, 8, p. 1655-1668 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    11 Scopus citations

  • Phase 1 study combining elotuzumab with autologous stem cell transplant and lenalidomide for multiple myeloma

    Coffey, D. G., Osman, K., Aleman, A., Bekri, S., Kats, S., Dhadwal, A., Catamero, D., Kim-Schulze, S., Gnjatic, S., Chari, A., Parekh, S., Jagannath, S. & Cho, H. J., 12 Apr 2024, In: Journal for ImmunoTherapy of Cancer. 12, 4, e008110.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    3 Scopus citations

  • Single-Cell View of Tumor Microenvironment Gradients in Pleural Mesothelioma

    Giotti, B., Dolasia, K., Zhao, W., Cai, P., Sweeney, R., Merritt, E., Kiner, E., Kim, G. S., Bhagwat, A., Nguyen, T., Hegde, S., Fitzgerald, B. G., Shroff, S., Dawson, T., Garcia-Barros, M., Abdul-Ghafar, J., Chen, R., Gnjatic, S., Soto, A. & Brody, R. & 11 others, Kim-Schulze, S., Chen, Z., Beaumont, K. G., Merad, M., Flores, R. M., Sebra, R. P., Horowitz, A., Marron, T. U., Tocheva, A., Wolf, A. & Tsankov, A. M., 1 Nov 2024, In: Cancer Discovery. 14, 11, p. 2262-2278 17 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    6 Scopus citations

  • SITC Clinical Immuno-Oncology Network (SCION) commentary on measurement and interpretation of essential biomarkers in early clinical trials

    Lotze, M. T., Cottrell, T., Bifulco, C., Chow, L., Cope, L., Gnjatic, S., Maecker, H. T. & Shen, J. Y. P., 21 Mar 2024, In: Journal for ImmunoTherapy of Cancer. 12, 3, e008655.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    3 Scopus citations

  • Systemic chemokine-modulatory regimen combined with neoadjuvant chemotherapy in patients with triple-negative breast cancer

    Gandhi, S., Slomba, R. T., Janes, C., Fitzpatrick, V., Miller, J., Attwood, K., Ioannou, G., Ozbey, S., De Souza, I., Roudko, V., Kumar, P., Kalathil, S., Kokolus, K. M., Wang, J., Cortes Gomez, E., Takabe, K., Edge, S., Young, J., Cappuccino, H. & Opyrchal, M. & 4 others, O'connor, T., Levine, E. G., Gnjatic, S. & Kalinski, P., 14 Nov 2024, In: Journal for ImmunoTherapy of Cancer. 12, 11, e010058.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Ten challenges and opportunities in computational immuno-oncology

    Bao, R., Hutson, A., Madabhushi, A., Jonsson, V. D., Rosario, S. R., Barnholtz-Sloan, J. S., Fertig, E. J., Marathe, H., Harris, L., Altreuter, J., Chen, Q., Dignam, J., Gentles, A. J., Gonzalez-Kozlova, E., Gnjatic, S., Kim, E., Long, M., Morgan, M., Ruppin, E. & Valen, D. V. & 6 others, Zhang, H., Vokes, N., Meerzaman, D., Liu, S., Van Allen, E. M. & Xing, Y., 26 Oct 2024, In: Journal for ImmunoTherapy of Cancer. 12, 10, e009721.

    Research output: Contribution to journal › Review article › peer-review

    Open Access

  • Tumor-Immune Signatures of Treatment Resistance to Brentuximab Vedotin with Ipilimumab and/or Nivolumab in

    Gonzalez-Kozlova, E., Huang, H. H., Jagede, O. A., Tuballes, K., Del Valle, D. M., Kelly, G., Patel, M., Xie, H., Harris, J., Argueta, K., Nie, K., Barcessat, V., Moravec, R., Altreuter, J., Duose, D. Y., Kahl, B. S., Ansell, S. M., Yu, J., Cerami, E. & Lindsay, J. R. & 4 others, Wistuba, I. I., Kim-Schulze, S., Diefenbach, C. S. & Gnjatic, S., Jul 2024, In: Cancer Research Communications. 4, 7, p. 1726-1737 12 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1 Scopus citations
  • 2023

    A methylation clock model of mild SARS-CoV-2 infection provides insight into immune dysregulation

    Biobank Team, 9 May 2023, In: Molecular Systems Biology. 19, 5, e11361.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    10 Scopus citations

  • Anti-Integrin αvβ6 Autoantibodies Are a Novel Biomarker That Antedate Ulcerative Colitis

    CCC-GEM Project Research Consortium & OSCCAR Consortium, Apr 2023, In: Gastroenterology. 164, 4, p. 619-629 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    39 Scopus citations

  • Antitumor immunity as the basis for durable disease-free treatment-free survival in patients with metastatic urothelial cancer

    Anker, J., Pal, S. K., Kim-Schulze, S., Wang, H., Halperin, R., Uzilov, A., Imai, N., Eikawa, S., Saito, T., Sebra, R., Hahn, N. M., Patel, M., Qi, J., Xie, H., Bhardwaj, N., Gnjatic, S. & Galsky, M. D., 22 Aug 2023, In: Journal for ImmunoTherapy of Cancer. 11, 8, e007613.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • A Phase I Trial of VEGF-A Inhibition Combined with PD-L1 Blockade for Recurrent Glioblastoma

    Chiu, D., Qi, J., Thin, T. H., Garcia-Barros, M., Lee, B., Hahn, M., Mandeli, J., Belani, P., Nael, K., Rashidipour, O., Ghatan, S., Hadjipanayis, C. G., Yong, R. L., Germano, I. M., Brody, R., Tsankova, N. M., Gnjatic, S., Kim-Schulze, S. & Hormigo, A., Jan 2023, In: Cancer Research Communications. 3, 1, p. 130-139 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    16 Scopus citations

  • Autoimmunity in Down’s syndrome via cytokines, CD4 T cells and CD11c+ B cells

    Malle, L., Patel, R. S., Martin-Fernandez, M., Stewart, O. J., Philippot, Q., Buta, S., Richardson, A., Barcessat, V., Taft, J., Bastard, P., Samuels, J., Mircher, C., Rebillat, A. S., Maillebouis, L., Vilaire-Meunier, M., Tuballes, K., Rosenberg, B. R., Trachtman, R., Casanova, J. L. & Notarangelo, L. D. & 3 others, Gnjatic, S., Bush, D. & Bogunovic, D., 9 Mar 2023, In: Nature. 615, 7951, p. 305-314 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    43 Scopus citations

  • Circulating proteins to predict COVID-19 severity

    The Mount Sinai COVID-19 Biobank Team, Dec 2023, In: Scientific Reports. 13, 1, 6236.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    7 Scopus citations

  • Cross center single-cell RNA sequencing study of the immune microenvironment in rapid progressing multiple myeloma

    Pilcher, W., Thomas, B. E., Bhasin, S. S., Jayasinghe, R. G., Yao, L., Gonzalez-Kozlova, E., Dasari, S., Kim-Schulze, S., Rahman, A., Patton, J., Fiala, M., Cheloni, G., Kourelis, T., Dhodapkar, M. V., Vij, R., Mehr, S., Hamilton, M., Cho, H. J., Auclair, D. & Avigan, D. E. & 4 others, Kumar, S. K., Gnjatic, S., Ding, L. & Bhasin, M., Dec 2023, In: npj Genomic Medicine. 8, 1, 3.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    16 Scopus citations

  • Erratum: Mapping Systemic Inflammation and Antibody Responses in Multisystem Inflammatory Syndrome in Children (MIS-C) (Cell (2020) 183(4) (982–995.e14), (S0092867420312319), (10.1016/j.cell.2020.09.034))

    Gruber, C. N., Patel, R. S., Trachtman, R., Lepow, L., Amanat, F., Krammer, F., Wilson, K. M., Onel, K., Geanon, D., Tuballes, K., Patel, M., Mouskas, K., O'Donnell, T., Merritt, E., Simons, N. W., Barcessat, V., Del Valle, D. M., Udondem, S., Kang, G. & Agashe, C. & 16 others, Karekar, N., Grabowska, J., Nie, K., Le Berichel, J., Xie, H., Beckmann, N., Gangadharan, S., Ofori-Amanfo, G., Laserson, U., Rahman, A., Kim-Schulze, S., Charney, A. W., Gnjatic, S., Gelb, B. D., Merad, M. & Bogunovic, D., 20 Jul 2023, In: Cell. 186, 15, p. 3325 1 p.

    Research output: Contribution to journal › Comment/debate

    Open Access
    7 Scopus citations

  • Evaluation of immunological responses to third COVID-19 vaccine among people treated with sphingosine receptor-1 modulators and anti-CD20 therapy

    Katz Sand, I., Gnjatic, S., Krammer, F., Tuballes, K., Carreño, J. M., Satyanarayan, S., Filomena, S., Staker, E., Tcheou, J., Miller, A., Fabian, M., Safi, N., Nichols, J., Patel, J., Krieger, S., Tankou, S., Horng, S., Klineova, S., Beck, E. & Merad, M. & 1 others, Lublin, F., Feb 2023, In: Multiple Sclerosis and Related Disorders. 70, 104486.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • Gemcitabine and cisplatin plus nivolumab as organ-sparing treatment for muscle-invasive bladder cancer: a phase 2 trial

    Galsky, M. D., Daneshmand, S., Izadmehr, S., Gonzalez-Kozlova, E., Chan, K. G., Lewis, S., Achkar, B. E., Dorff, T. B., Cetnar, J. P., Neil, B. O., D’Souza, A., Mamtani, R., Kyriakopoulos, C., Jun, T., Gogerly-Moragoda, M., Brody, R., Xie, H., Nie, K., Kelly, G. & Horwitz, A. & 19 others, Kinoshita, Y., Ellis, E., Nose, Y., Ioannou, G., Cabal, R., Haines, G. K., Wang, L., Mouw, K. W., Samstein, R. M., Mehrazin, R., Bhardwaj, N., Yu, M., Zhao, Q., Kim-Schulze, S., Sebra, R., Zhu, J., Gnjatic, S., Sfakianos, J. & Pal, S. K., Nov 2023, In: Nature Medicine. 29, 11, p. 2825-2834 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    53 Scopus citations

  • Germline rare deleterious variant load alters cancer risk, age of onset and tumor characteristics

    Esai Selvan, M., Onel, K., Gnjatic, S., Klein, R. J. & Gümüş, Z. H., Dec 2023, In: npj Precision Oncology. 7, 1, 13.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    9 Scopus citations

  • IgG memory B cells expressing IL4R and FCER2 are associated with atopic diseases

    Aranda, C. J., Gonzalez-Kozlova, E., Saunders, S. P., Fernandes-Braga, W., Ota, M., Narayanan, S., He, J. S., Del Duca, E., Swaroop, B., Gnjatic, S., Shattner, G., Reibman, J., Soter, N. A., Guttman-Yassky, E. & Curotto de Lafaille, M. A., Mar 2023, In: Allergy: European Journal of Allergy and Clinical Immunology. 78, 3, p. 752-766 15 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    43 Scopus citations

  • Immunophenotypic correlates of sustained MRD negativity in patients with multiple myeloma

    Coffey, D. G., Maura, F., Gonzalez-Kozlova, E., Diaz-Mejia, J. J., Luo, P., Zhang, Y., Xu, Y., Warren, E. H., Dawson, T., Lee, B., Xie, H., Smith, E., Ciardiello, A., Cho, H. J., Rahman, A., Kim-Schulze, S., Diamond, B., Lesokhin, A., Kazandjian, D. & Pugh, T. J. & 3 others, Green, D. J., Gnjatic, S. & Landgren, O., Dec 2023, In: Nature Communications. 14, 1, 5335.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    15 Scopus citations

  • Intratumoral dendritic cell–CD4+ T helper cell niches enable CD8+ T cell differentiation following PD-1 blockade in hepatocellular carcinoma

    Magen, A., Hamon, P., Fiaschi, N., Soong, B. Y., Park, M. D., Mattiuz, R., Humblin, E., Troncoso, L., D’souza, D., Dawson, T., Kim, J., Hamel, S., Buckup, M., Chang, C., Tabachnikova, A., Schwartz, H., Malissen, N., Lavin, Y., Soares-Schanoski, A. & Giotti, B. & 33 others, Hegde, S., Ioannou, G., Gonzalez-Kozlova, E., Hennequin, C., Le Berichel, J., Zhao, Z., Ward, S. C., Fiel, I., Kou, B., Dobosz, M., Li, L., Adler, C., Ni, M., Wei, Y., Wang, W., Atwal, G. S., Kundu, K., Cygan, K. J., Tsankov, A. M., Rahman, A., Price, C., Fernandez, N., He, J., Gupta, N. T., Kim-Schulze, S., Gnjatic, S., Kenigsberg, E., Deering, R. P., Schwartz, M., Marron, T. U., Thurston, G., Kamphorst, A. O. & Merad, M., Jun 2023, In: Nature Medicine. 29, 6, p. 1389-1399 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    143 Scopus citations

  • Mechanisms of response and resistance to combined decitabine and ipilimumab for advanced myeloid disease

    Penter, L., Liu, Y., Wolff, J. O., Yang, L., Taing, L., Jhaveri, A., Southard, J., Patel, M., Cullen, N. M., Pfaff, K. L., Cieri, N., Oliveira, G., Kim-Schulze, S., Ranasinghe, S., Leonard, R., Robertson, T., Morgan, E. A., Chen, H. X., Song, M. H. & Thurin, M. & 17 others, Li, S., Rodig, S. J., Cibulskis, C., Gabriel, S., Bachireddy, P., Ritz, J., Streicher, H., Neuberg, D. S., Hodi, F. S., Davids, M. S., Gnjatic, S., Livak, K. J., Altreuter, J., Michor, F., Soiffer, R. J., Garcia, J. S. & Wu, C. J., 13 Apr 2023, In: Blood. 141, 15, p. 1817-1830 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    34 Scopus citations

  • Molecular states during acute COVID-19 reveal distinct etiologies of long-term sequelae

    The Mount Sinai COVID-19 Biobank Team, 1 Jan 2023, In: Nature Medicine. 29, 1, p. 236-246 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    36 Scopus citations

  • Phase I Study of a Multivalent WT1 Peptide Vaccine (Galinpepimut-S) in Combination with Nivolumab in Patients with WT1-Expressing Ovarian Cancer in Second or Third Remission

    Manning-Geist, B. L., Gnjatic, S., Aghajanian, C., Konner, J., Kim, S. H., Sarasohn, D., Soldan, K., Tew, W. P., Sarlis, N. J., Zamarin, D., Kravetz, S., Laface, I., Rasalan-Ho, T., Qi, J., Wong, P., Sabbatini, P. J. & O’Cearbhaill, R. E., Mar 2023, In: Cancers. 15, 5, 1458.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • Pitfalls in machine learning-based assessment of tumor-infiltrating lymphocytes in breast cancer: a report of the international immuno-oncology biomarker working group

    Thagaard, J., Broeckx, G., Page, D. B., Jahangir, C. A., Verbandt, S., Kos, Z., Gupta, R., Khiroya, R., Abduljabbar, K., Acosta Haab, G., Acs, B., Akturk, G., Almeida, J. S., Alvarado-Cabrero, I., Amgad, M., Azmoudeh-Ardalan, F., Badve, S., Baharun, N. B., Balslev, E. & Bellolio, E. R. & 122 others, Bheemaraju, V., Blenman, K. R. M., Botinelly Mendonça Fujimoto, L., Bouchmaa, N., Burgues, O., Chardas, A., Chon U Cheang, M., Ciompi, F., Cooper, L. A. D., Coosemans, A., Corredor, G., Dahl, A. B., Dantas Portela, F. L., Deman, F., Demaria, S., Doré Hansen, J., Dudgeon, S. N., Ebstrup, T., Elghazawy, M., Fernandez-Martín, C., Fox, S. B., Gallagher, W. M., Giltnane, J. M., Gnjatic, S., Gonzalez-Ericsson, P. I., Grigoriadis, A., Halama, N., Hanna, M. G., Harbhajanka, A., Hart, S. N., Hartman, J., Hauberg, S., Hewitt, S., Hida, A. I., Horlings, H. M., Husain, Z., Hytopoulos, E., Irshad, S., Janssen, E. A. M., Kahila, M., Kataoka, T. R., Kawaguchi, K., Kharidehal, D., Khramtsov, A. I., Kiraz, U., Kirtani, P., Kodach, L. L., Korski, K., Kovács, A., Laenkholm, A. V., Lang-Schwarz, C., Larsimont, D., Lennerz, J. K., Lerousseau, M., Li, X., Ly, A., Madabhushi, A., Maley, S. K., Manur Narasimhamurthy, V., Marks, D. K., McDonald, E. S., Mehrotra, R., Michiels, S., Minhas, F. U. A. A., Mittal, S., Moore, D. A., Mushtaq, S., Nighat, H., Papathomas, T., Penault-Llorca, F., Perera, R. D., Pinard, C. J., Pinto-Cardenas, J. C., Pruneri, G., Pusztai, L., Rahman, A., Rajpoot, N. M., Rapoport, B. L., Rau, T. T., Reis-Filho, J. S., Ribeiro, J. M., Rimm, D., Roslind, A., Vincent-Salomon, A., Salto-Tellez, M., Saltz, J., Sayed, S., Scott, E., Siziopikou, K. P., Sotiriou, C., Stenzinger, A., Sughayer, M. A., Sur, D., Fineberg, S., Symmans, F., Tanaka, S., Taxter, T., Tejpar, S., Teuwen, J., Thompson, E. A., Tramm, T., Tran, W. T., van der Laak, J., van Diest, P. J., Verghese, G. E., Viale, G., Vieth, M., Wahab, N., Walter, T., Waumans, Y., Wen, H. Y., Yang, W., Yuan, Y., Zin, R. M., Adams, S., Bartlett, J., Loibl, S., Denkert, C., Savas, P., Loi, S., Salgado, R. & Specht Stovgaard, E., Aug 2023, In: Journal of Pathology. 260, 5, p. 498-513 16 p.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    24 Scopus citations

  • Proteomic characterization of acute kidney injury in patients hospitalized with SARS-CoV2 infection

    Paranjpe, I., Jayaraman, P., Su, C. Y., Zhou, S., Chen, S., Thompson, R., Del Valle, D. M., Kenigsberg, E., Zhao, S., Jaladanki, S., Chaudhary, K., Ascolillo, S., Vaid, A., Gonzalez-Kozlova, E., Kauffman, J., Kumar, A., Paranjpe, M., Hagan, R. O., Kamat, S. & Gulamali, F. F. & 23 others, Xie, H., Harris, J., Patel, M., Argueta, K., Batchelor, C., Nie, K., Dellepiane, S., Scott, L., Levin, M. A., He, J. C., Suarez-Farinas, M., Coca, S. G., Chan, L., Azeloglu, E. U., Schadt, E., Beckmann, N., Gnjatic, S., Merad, M., Kim-Schulze, S., Richards, B., Glicksberg, B. S., Charney, A. W. & Nadkarni, G. N., Dec 2023, In: Communications Medicine. 3, 1, 81.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    11 Scopus citations

  • Spatial analyses of immune cell infiltration in cancer: current methods and future directions. A report of the International Immuno-Oncology Biomarker Working Group on Breast Cancer

    Page, D. B., Broeckx, G., Jahangir, C. A., Verbandt, S., Gupta, R. R., Thagaard, J., Khiroya, R., Kos, Z., Abduljabbar, K., Acosta Haab, G., Acs, B., Akturk, G., Almeida, J. S., Alvarado-Cabrero, I., Azmoudeh-Ardalan, F., Badve, S., Baharun, N. B., Bellolio, E. R., Bheemaraju, V. & Blenman, K. R. M. & 114 others, Botinelly Mendonça Fujimoto, L., Bouchmaa, N., Burgues, O., Cheang, M. C. U., Ciompi, F., Cooper, L. A. D., Coosemans, A., Corredor, G., Dantas Portela, F. L., Deman, F., Demaria, S., Dudgeon, S. N., Elghazawy, M., Ely, S., Fernandez-Martín, C., Fineberg, S., Fox, S. B., Gallagher, W. M., Giltnane, J. M., Gnjatic, S., Gonzalez-Ericsson, P. I., Grigoriadis, A., Halama, N., Hanna, M. G., Harbhajanka, A., Hardas, A., Hart, S. N., Hartman, J., Hewitt, S., Hida, A. I., Horlings, H. M., Husain, Z., Hytopoulos, E., Irshad, S., Janssen, E. A. M., Kahila, M., Kataoka, T. R., Kawaguchi, K., Kharidehal, D., Khramtsov, A. I., Kiraz, U., Kirtani, P., Kodach, L. L., Korski, K., Kovács, A., Laenkholm, A. V., Lang-Schwarz, C., Larsimont, D., Lennerz, J. K., Lerousseau, M., Li, X., Ly, A., Madabhushi, A., Maley, S. K., Manur Narasimhamurthy, V., Marks, D. K., McDonald, E. S., Mehrotra, R., Michiels, S., Minhas, F. U. A. A., Mittal, S., Moore, D. A., Mushtaq, S., Nighat, H., Papathomas, T., Penault-Llorca, F., Perera, R. D., Pinard, C. J., Pinto-Cardenas, J. C., Pruneri, G., Pusztai, L., Rahman, A., Rajpoot, N. M., Rapoport, B. L., Rau, T. T., Reis-Filho, J. S., Ribeiro, J. M., Rimm, D., Vincent-Salomon, A., Salto-Tellez, M., Saltz, J., Sayed, S., Siziopikou, K. P., Sotiriou, C., Stenzinger, A., Sughayer, M. A., Sur, D., Symmans, F., Tanaka, S., Taxter, T., Tejpar, S., Teuwen, J., Thompson, E. A., Tramm, T., Tran, W. T., van der Laak, J., van Diest, P. J., Verghese, G. E., Viale, G., Vieth, M., Wahab, N., Walter, T., Waumans, Y., Wen, H. Y., Yang, W., Yuan, Y., Adams, S., Bartlett, J. M. S., Loibl, S., Denkert, C., Savas, P., Loi, S., Salgado, R. & Specht Stovgaard, E., Aug 2023, In: Journal of Pathology. 260, 5, p. 514-532 19 p.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    16 Scopus citations
  • 2022

    A shift in lung macrophage composition is associated with COVID-19 severity and recovery

    Chen, S. T., Park, M. D., Del Valle, D. M., Buckup, M., Tabachnikova, A., Thompson, R. C., Simons, N. W., Mouskas, K., Lee, B., Geanon, D., D'Souza, D., Dawson, T., Marvin, R., Nie, K., Zhao, Z., LeBerichel, J., Chang, C., Jamal, H., Akturk, G. & Chaddha, U. & 16 others, Mathews, K., Acquah, S., Brown, S. A., Reiss, M., Harkin, T., Feldmann, M., Powell, C. A., Hook, J. L., Kim-Schulze, S., Rahman, A. H., Brown, B. D., Beckmann, N. D., Gnjatic, S., Kenigsberg, E., Charney, A. W. & Merad, M., 14 Sep 2022, In: Science Translational Medicine. 14, 662, abn5168.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    45 Scopus citations

  • Author Correction: Neoadjuvant clinical trials provide a window of opportunity for cancer drug discovery (Nature Medicine, (2022), 28, 4, (626-629), 10.1038/s41591-022-01681-x)

    Marron, T. U., Galsky, M. D., Taouli, B., Fiel, M. I., Ward, S., Kim, E., Yankelevitz, D., Doroshow, D., Guttman-Yassky, E., Ungar, B., Mehandru, S., Golas, B. J., Labow, D., Sfakianos, J., Nair, S. S., Chakravarty, D., Buckstein, M., Song, X., Kenigsberg, E. & Gnjatic, S. & 6 others, Brown, B. D., Sparano, J., Tewari, A., Schwartz, M., Bhardwaj, N. & Merad, M., Aug 2022, In: Nature Medicine. 28, 8, p. 1723 1 p.

    Research output: Contribution to journal › Comment/debate

    Open Access
    1 Scopus citations

  • Cancer vaccines

    Schiller, J. T., Lowy, D. R., Frazer, I. H., Finn, O. J., Vilar, E., Lyerly, H. K., Gnjatic, S., Zaidi, N., Ott, P. A., Balachandran, V. P., Dietrich, P. Y., Migliorini, D., Vonderheide, R. H. & Domchek, S. M., 13 Jun 2022, In: Cancer Cell. 40, 6, p. 559-564 6 p.

    Research output: Contribution to journal › Comment/debate

    Open Access
    30 Scopus citations

  • Comprehensive Characterization of the Check for updates Multiple Myeloma Immune Microenvironment Using Integrated scRNA-seq, CyTOF, and CITE-seq Analysis

    Yao, L., Jayasinghe, R. G., Lee, B. H., Bhasin, S. S., Pilcher, W., Doxie, D. B., Gonzalez-Kozlova, E., Dasari, S., Fiala, M. A., Pita-Juarez, Y., Strausbauch, M., Kelly, G., Thomas, B. E., Kumar, S. K., Cho, H. J., Anderson, E., Wendl, M. C., Dawson, T., D’souza, D. & Oh, S. T. & 17 others, Cheloni, G., Li, Y., DiPersio, J. F., Rahman, A. H., Dhodapkar, K. M., Kim-Schulze, S., Vij, R., Vlachos, I. S., Mehr, S., Hamilton, M., Auclair, D., Kourelis, T., Avigan, D., Dhodapkar, M. V., Gnjatic, S., Bhasin, M. K. & Ding, L., 2022, In: Cancer Research Communications. 2, 10, p. 1255-1265 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    20 Scopus citations

  • Correction: The dynamic changes and sex differences of 147 immune-related proteins during acute COVID-19 in 580 individuals (Clinical Proteomics, (2022), 19, 1, (34), 10.1186/s12014-022-09371-z)

    The Mount Sinai COVID-19 Biobank Team, Dec 2022, In: Clinical Proteomics. 19, 1, 40.

    Research output: Contribution to journal › Comment/debate

    Open Access

  • Early non-neutralizing, afucosylated antibody responses are associated with COVID-19 severity

    Chakraborty, S., Gonzalez, J. C., Sievers, B. L., Mallajosyula, V., Chakraborty, S., Dubey, M., Ashraf, U., Cheng, B. Y. L., Kathale, N., Tran, K. Q. T., Scallan, C., Sinnott, A., Cassidy, A., Chen, S. T., Gelbart, T., Gao, F., Golan, Y., Ji, X., Kim-Schulze, S. & Prahl, M. & 22 others, Gaw, S. L., Gnjatic, S., Marron, T. U., Merad, M., Arunachalam, P. S., Boyd, S. D., Davis, M. M., Holubar, M., Khosla, C., Maecker, H. T., Maldonado, Y., Mellins, E. D., Nadeau, K. C., Pulendran, B., Singh, U., Subramanian, A., Utz, P. J., Sherwood, R., Zhang, S., Jagannathan, P., Tan, G. S. & Wang, T. T., 9 Mar 2022, In: Science Translational Medicine. 14, 635, abm7853.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    80 Scopus citations

  • Exome-wide association study to identify rare variants influencing COVID-19 outcomes: Results from the Host Genetics Initiative

    Butler-Laporte, G., Povysil, G., Kosmicki, J. A., Cirulli, E. T., Drivas, T., Furini, S., Saad, C., Schmidt, A., Olszewski, P., Korotko, U., Quinodoz, M., Çelik, E., Kundu, K., Walter, K., Jung, J., Stockwell, A. D., Sloofman, L. G., Jordan, D. M., Thompson, R. C. & Del Valle, D. & 139 others, Simons, N., Cheng, E., Sebra, R., Schadt, E. E., Kim-Schulze, S., Gnjatic, S., Merad, M., Buxbaum, J. D., Beckmann, N. D., Charney, A. W., Przychodzen, B., Chang, T., Pottinger, T. D., Shang, N., Brand, F., Fava, F., Mari, F., Chwialkowska, K., Niemira, M., Pula, S., Kenneth Baillie, J., Stuckey, A., Salas, A., Bello, X., Pardo-Seco, J., Gómez-Carballa, A., Rivero-Calle, I., Martinón-Torres, F., Ganna, A., Karczewski, K. J., Veerapen, K., Bourgey, M., Bourque, G., Eveleigh, R. J. M., Forgetta, V., Morrison, D., Langlais, D., Lathrop, M., Mooser, V., Nakanishi, T., Frithiof, R., Hultström, M., Lipcsey, M., Marincevic-Zuniga, Y., Nordlund, J., Schiabor Barrett, K. M., Lee, W., Bolze, A., White, S., Riffle, S., Tanudjaja, F., Sandoval, E., Neveux, I., Dabe, S., Casadei, N., Motameny, S., Alaamery, M., Massadeh, S., Aljawini, N., Almutairi, M. S., Arabi, Y. M., Alqahtani, S. A., Al Harthi, F. S., Almutairi, A., Alqubaishi, F., Alotaibi, S., Binowayn, A., Alsolm, E. A., Bardisy, H. E., Fawzy, M., Cai, F., Soranzo, N., Butterworth, A., Center, R. G., Geschwind, D. H., Arteaga, S., Stephens, A., Butte, M. J., Boutros, P. C., Yamaguchi, T. N., Tao, S., Eng, S., Sanders, T., Tung, P. J., Broudy, M. E., Pan, Y., Gonzalez, A., Chavan, N., Johnson, R., Pasaniuc, B., Yaspan, B., Smieszek, S., Rivolta, C., Bibert, S., Bochud, P. Y., Dabrowski, M., Zawadzki, P., Sypniewski, M., Kaja, E., Chariyavilaskul, P., Nilaratanakul, V., Hirankarn, N., Shotelersuk, V., Pongpanich, M., Phokaew, C., Chetruengchai, W., Tokunaga, K., Sugiyama, M., Kawai, Y., Hasegawa, T., Naito, T., Namkoong, H., Edahiro, R., Kimura, A., Ogawa, S., Kanai, T., Fukunaga, K., Okada, Y., Imoto, S., Miyano, S., Mangul, S., Abedalthagafi, M. S., Zeberg, H., Grzymski, J. J., Washington, N. L., Ossowski, S., Ludwig, K. U., Schulte, E. C., Riess, O., Moniuszko, M., Kwasniewski, M., Mbarek, H., Ismail, S. I., Verma, A., Goldstein, D. B., Kiryluk, K., Renieri, A., Ferreira, M. A. R. & Brent Richards, J., 3 Nov 2022, In: PLoS Genetics. 18, 11, e1010367.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    34 Scopus citations