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Search results

  • 2023

    A noncanonical IRAK4-IRAK1 pathway counters DNA damage–induced apoptosis independently of TLR/IL-1R signaling

    Li, Y., Shah, R. B., Sarti, S., Belcher, A. L., Lee, B. J., Gorbatenko, A., Nemati, F., Yu, H., Stanley, Z., Rahman, M., Shao, Z., Silva, J. M., Zha, S. & Sidi, S., 2023, In: Science Signaling. 16, 816

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Network-based assessment of HDAC6 activity predicts preclinical and clinical responses to the HDAC6 inhibitor ricolinostat in breast cancer

    Zeleke, T. Z., Pan, Q., Chiuzan, C., Onishi, M., Li, Y., Tan, H., Alvarez, M. J., Honan, E., Yang, M., Chia, P. L., Mukhopadhyay, P., Kelly, S., Wu, R., Fenn, K., Trivedi, M. S., Accordino, M., Crew, K. D., Hershman, D. L., Maurer, M., Jones, S., & 6 othersHigh, A., Peng, J., Califano, A., Kalinsky, K., Yu, J. & Silva, J., Feb 2023, In: Nature Cancer. 4, 2, p. 257-275 19 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    14 Scopus citations
  • Open Access
  • Reply to: Ricolinostat is not a highly selective HDAC6 inhibitor

    Silva, J., Yu, J. & Kalinsky, K., Jun 2023, In: Nature Cancer. 4, 6, p. 809-811 3 p.

    Research output: Contribution to journalLetterpeer-review

    1 Scopus citations
  • The Breast Cancer Single-Cell Atlas: Defining cellular heterogeneity within model cell lines and primary tumors to inform disease subtype, stemness, and treatment options

    Dave, A., Charytonowicz, D., Francoeur, N. J., Beaumont, M., Beaumont, K., Schmidt, H., Zeleke, T., Silva, J. & Sebra, R., Jun 2023, In: Cellular oncology (Dordrecht). 46, 3, p. 603-628 26 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • 2022

    A microRNA Cluster Controls Fat Cell Differentiation and Adipose Tissue Expansion By Regulating SNCG

    Rodríguez-Barrueco, R., Latorre, J., Devis-Jáuregui, L., Lluch, A., Bonifaci, N., Llobet, F. J., Olivan, M., Coll-Iglesias, L., Gassner, K., Davis, M. L., Moreno-Navarrete, J. M., Castells-Nobau, A., Plata-Peña, L., Dalmau-Pastor, M., Höring, M., Liebisch, G., Olkkonen, V. M., Arnoriaga-Rodríguez, M., Ricart, W., Fernández-Real, J. M., & 3 othersSilva, J. M., Ortega, F. J. & Llobet-Navas, D., 2 Feb 2022, In: Advanced Science. 9, 4, 2104759.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    7 Scopus citations
  • Disruption prediction with artificial intelligence techniques in tokamak plasmas

    JET Contributors, 1 Jul 2022, In: Nature Physics. 18, 7, p. 741-750 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    22 Scopus citations
  • Enhanced performance in fusion plasmas through turbulence suppression by megaelectronvolt ions

    JET Contributors, 1 Jul 2022, In: Nature Physics. 18, 7, p. 776-782 7 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    37 Scopus citations
  • Overview of JET results for optimising ITER operation

    Mailloux, J., Abid, N., Abraham, K., Abreu, P., Adabonyan, O., Adrich, P., Afanasev, V., Afzal, M., Ahlgren, T., Aho-Mantila, L., Aiba, N., Airila, M., Akhtar, M., Albanese, R., Alderson-Martin, M., Alegre, D., Aleiferis, S., Aleksa, A., Alekseev, A. G., Alessi, E., & 1,203 othersAleynikov, P., Algualcil, J., Ali, M., Allinson, M., Alper, B., Alves, E., Ambrosino, G., Ambrosino, R., Amosov, V., Sundén, E. A., Andrew, P., Angelini, B. M., Angioni, C., Antoniou, I., Appel, L. C., Appelbee, C., Aria, S., Ariola, M., Artaserse, G., Arter, W., Artigues, V., Asakura, N., Ash, A., Ashikawa, N., Aslanyan, V., Astrain, M., Asztalos, O., Auld, D., Auriemma, F., Austin, Y., Avotina, L., Aymerich, E., Baciero, A., Bairaktaris, F., Balbin, J., Balbinot, L., Balboa, I., Balden, M., Balshaw, C., Balshaw, N., Bandaru, V. K., Banks, J., Baranov, Y. F., Barcellona, C., Barnard, A., Barnard, M., Barnsley, R., Barth, A., Baruzzo, M., Barwell, S., Bassan, M., Batista, A., Batistoni, P., Baumane, L., Bauvir, B., Baylor, L., Beaumont, P. S., Beckett, D., Begolli, A., Beidler, M., Bekris, N., Beldishevski, M., Belli, E., Belli, F., Belonohy, Ben Yaala, M., Benayas, J., Bentley, J., Bergsåker, H., Bernardo, J., Bernert, M., Berry, M., Bertalot, L., Betar, H., Beurskens, M., Bickerton, S., Bieg, B., Bielecki, J., Bierwage, A., Biewer, T., Bilato, R., Bílková, P., Birkenmeier, G., Bishop, H., Bizarro, J. P. S., Blackburn, J., Blanchard, P., Blatchford, P., Bobkov, V., Boboc, A., Bohm, P., Bohm, T., Bolshakova, I., Bolzonella, T., Bonanomi, N., Bonfiglio, D., Bonnin, X., Bonofiglo, P., Boocock, S., Booth, A., Booth, J., Borba, D., Borodin, D., Borodkina, I., Boulbe, C., Bourdelle, C., Bowden, M., Boyd, K., Mihalić, I. B., Bradnam, S. C., Braic, V., Brandt, L., Bravanec, R., Breizman, B., Brett, A., Brezinsek, S., Brix, M., Bromley, K., Brown, B., Brunetti, D., Buckingham, R., Buckley, M., Budny, R., Buermans, J., Bufferand, H., Buratti, P., Burgess, A., Buscarino, A., Busse, A., Butcher, D., Cal, E. D. L., Calabrò, G., Calacci, L., Calado, R., Camenen, Y., Canal, G., Cannas, B., Cappelli, M., Carcangiu, S., Card, P., Cardinali, A., Carman, P., Carnevale, D., Carr, M., Carralero, D., Carraro, L., Carvalho, I. S., Carvalho, P., Casiraghi, I., Casson, F. J., Castaldo, C., Catalan, J. P., Catarino, N., Causa, F., Cavedon, M., Cecconello, M., Challis, C. D., Chamberlain, B., Chang, C. S., Chankin, A., Chapman, B., Chernyshova, M., Chiariello, A., Chmielewski, P., Chomiczewska, A., Chone, L., Ciraolo, G., Ciric, D., Citrin, J., Ciupinski, L., Clark, M., Clarkson, R., Clements, C., Cleverly, M., Coad, J. P., Coates, P., Cobalt, A., Coccorese, V., Coelho, R., Coenen, J. W., Coffey, I. H., Colangeli, A., Colas, L., Collins, C., Collins, J., Collins, S., Conka, D., Conroy, S., Conway, B., Conway, N. J., Coombs, D., Cooper, P., Cooper, S., Corradino, C., Corrigan, G., Coster, D., Cox, P., Craciunescu, T., Cramp, S., Crapper, C., Craven, D., Craven, R., Esposito, M. C., Croci, G., Croft, D., Croitoru, A., Crombé, K., Cronin, T., Cruz, N., Crystal, C., Cseh, G., Cufar, A., Cullen, A., Curuia, M., Czarski, T., Dabirikhah, H., Molin, A. D., Dale, E., Dalgliesh, P., Dalley, S., Dankowski, J., David, P., Davies, A., Davies, S., Davis, G., Dawson, K., Dawson, S., Day, I. E., De Bock, M., De Temmerman, G., De Tommasi, G., Deakin, K., Deane, J., Dejarnac, R., Del Sarto, D., Delabie, E., Del-Castillo-Negrete, D., Dempsey, A., Dendy, R. O., Devynck, P., Di Siena, A., Di Troia, C., Dickson, T., Dinca, P., Dittmar, T., Dobrashian, J., Doerner, R. P., Donné, A. J. H., Dorling, S., Dormido-Canto, S., Douai, D., Dowson, S., Doyle, R., Dreval, M., Drewelow, P., Drews, P., Drummond, G., Duckworth, P., Dudding, H., Dumont, R., Dumortier, P., Dunai, D., Dunatov, T., Dunne, M., Ďuran, I., Durodié, F., Dux, R., Dvornova, A., Eastham, R., Edwards, J., Eich, T., Eichorn, A., Eidietis, N., Eksaeva, A., El Haroun, H., Ellwood, G., Elsmore, C., Embreus, O., Emery, S., Ericsson, G., Eriksson, B., Eriksson, F., Eriksson, J., Eriksson, L. G., Ertmer, S., Esquembri, S., Esquisabel, A. L., Estrada, T., Evans, G., Evans, S., Fable, E., Fagan, D., Faitsch, M., Falessi, M., Fanni, A., Farahani, A., Farquhar, I., Fasoli, A., Faugeras, B., Fazinić, S., Felici, F., Felton, R., Fernandes, A., Fernandes, H., Ferrand, J., Ferreira, D. R., Ferreira, J., Ferrò, G., Fessey, J., Ficker, O., Field, A. R., Figueiredo, A., Figueiredo, J., Fil, A., Fil, N., Finburg, P., Fiorucci, D., Fischer, U., Fishpool, G., Fittill, L., Fitzgerald, M., Flammini, D., Flanagan, J., Flinders, K., Foley, S., Fonnesu, N., Fontana, M., Fontdecaba, J. M., Forbes, S., Formisano, A., Fornal, T., Fortuna, L., Fortuna-Zalesna, E., Fortune, M., Fowler, C., Fransson, E., Frassinetti, L., Freisinger, M., Fresa, R., Fridström, R., Frigione, D., Fülöp, T., Furseman, M., Fusco, V., Futatani, S., Gadariya, D., Gál, K., Galassi, D., Gałzka, K., Galeani, S., Gallart, D., Galvão, R., Gao, Y., Garcia, J., García-Muñoz, M., Gardener, M., Garzotti, L., Gaspar, J., Gatto, R., Gaudio, P., Gear, D., Gebhart, T., Gee, S., Gelfusa, M., George, R., Gerasimov, S. N., Gervasini, G., Gethins, M., Ghani, Z., Gherendi, M., Ghezzi, F., Giacalone, J. C., Giacomelli, L., Giacometti, G., Gibson, C., Gibson, K. J., Gil, L., Gillgren, A., Gin, D., Giovannozzi, E., Giroud, C., Glen, R., Glöggler, S., Goff, J., Gohil, P., Goloborodko, V., Gomes, R., Gonçalves, B., Goniche, M., Goodyear, A., Gore, S., Gorini, G., Görler, T., Gotts, N., Goulding, R., Gow, E., Graham, B., Graves, J. P., Greuner, H., Grierson, B., Griffiths, J., Griph, S., Grist, D., Gromelski, W., Groth, M., Grove, R., Gruca, M., Guard, D., Gupta, N., Gurl, C., Gusarov, A., Hackett, L., Hacquin, S., Hager, R., Hägg, L., Hakola, A., Halitovs, M., Hall, S., Hall, S. A., Hallworth-Cook, S., Ham, C. J., Hamaguchi, D., Hamed, M., Hamlyn-Harris, C., Hammond, K., Harford, E., Harrison, J. R., Harting, D., Hatano, Y., Hatch, D. R., Haupt, T., Hawes, J., Hawkes, N. C., Hawkins, J., Hayashi, T., Hazael, S., Hazel, S., Heesterman, P., Heidbrink, B., Helou, W., Hemming, O., Henderson, S. S., Henriques, R. B., Hepple, D., Herfindal, J., Hermon, G., Hill, J., Hillesheim, J. C., Hizanidis, K., Hjalmarsson, A., Ho, A., Hobirk, J., Hoenen, O., Hogben, C., Hollingsworth, A., Hollis, S., Hollmann, E., Hölzl, M., Homan, B., Hook, M., Hopley, D., Horáček, J., Horsley, D., Horsten, N., Horton, A., Horton, L. D., Horvath, L., Hotchin, S., Howell, R., Hu, Z., Huber, A., Huber, V., Huddleston, T., Huijsmans, G. T. A., Huynh, P., Hynes, A., Iliasova, M., Imrie, D., Imríšek, M., Ingleby, J., Innocente, P., Insulander Björk, K., Isernia, N., Ivanova-Stanik, I., Ivings, E., Jablonski, S., Jachmich, S., Jackson, T., Jacquet, P., Järleblad, H., Jaulmes, F., Rodriguez, J. J., Jepu, I., Joffrin, E., Johnson, R., Johnson, T., Johnston, J., Jones, C., Jones, G., Jones, L., Jones, N., Jones, T., Joyce, A., Juarez, R., Juvonen, M., Kalniņa, P., Kaltiaisenaho, T., Kaniewski, J., Kantor, A., Kappatou, A., Karhunen, J., Karkinsky, D., Kashchuk, Y., Kaufman, M., Kaveney, G., Kazakov, Y. O., Kazantzidis, V., Keeling, D. L., Kelly, R., Kempenaars, M., Kennedy, C., Kennedy, D., Kent, J., Khan, K., Khilkevich, E., Kiefer, C., Kilpeläinen, J., Kim, C., Kim, H. T., Kim, S. H., King, D. B., King, R., Kinna, D., Kiptily, V. G., Kirjasuo, A., Kirov, K. K., Kirschner, A., Kiviniemi, T., Kizane, G., Klas, M., Klepper, C., Klix, A., Kneale, G., Knight, M., Knight, P., Knights, R., Knipe, S., Knolker, M., Knott, S., Kocan, M., Köchl, F., Kodeli, I., Kolesnichenko, Y., Kominis, Y., Kong, M., Korovin, V., Kos, B., Kos, D., Koslowski, H. R., Kotschenreuther, M., Koubiti, M., Kowalska-Strzȩciwilk, E., Koziol, K., Krasilnikov, A., Krasilnikov, V., Kresina, M., Krieger, K., Krishnan, N., Krivska, A., Kruezi, U., Ksiazek, I., Kukushkin, A. B., Kumpulainen, H., Kurki-Suonio, T., Kurotaki, H., Kwak, S., Kwon, O. J., Laguardia, L., Lagzdina, E., Lahtinen, A., Laing, A., Lam, N., Lambertz, H. T., Lane, B., Lane, C., Neto, E. L., Łaszyńska, E., Lawson, K. D., Lazaros, A., Lazzaro, E., Learoyd, G., Lee, C., Lee, S. E., Leerink, S., Leeson, T., Lefebvre, X., Leggate, H. J., Lehmann, J., Lehnen, M., Leichtle, D., Leipold, F., Lengar, I., Lennholm, M., Gutierrez, E. L., Lepiavko, B., Leppänen, J., Lerche, E., Lescinskis, A., Lewis, J., Leysen, W., Li, L., Li, Y., Likonen, J., Linsmeier, C., Lipschultz, B., Litaudon, X., Litherland-Smith, E., Liu, F., Loarer, T., Loarte, A., Lobel, R., Lomanowski, B., Lomas, P. J., López, J. M., Lorenzini, R., Loreti, S., Losada, U., Loschiavo, V. P., Loughlin, M., Louka, Z., Lovell, J., Lowe, T., Lowry, C., Lubbad, S., Luce, T., Lucock, R., Lukin, A., Luna, C., Luna, E. D. L., Lungaroni, M., Lungu, C. P., Lunt, T., Lutsenko, V., Lyons, B., Lyssoivan, A., Machielsen, M., Macusova, E., Mäenpää, R., Maggi, C. F., Maggiora, R., Magness, M., Mahesan, S., Maier, H., Maingi, R., Malinowski, K., Manas, P., Mantica, P., Mantsinen, M. J., Manyer, J., Manzanares, A., Maquet, P., Marceca, G., Marcenko, N., Marchetto, C., Marchuk, O., Mariani, A., Mariano, G., Marin, M., Marinelli, M., Markovič, T., Marocco, D., Marot, L., Marsden, S., Marsh, J., Marshall, R., Martellucci, L., Martin, A., Martin, A. J., Martone, R., Maruyama, S., Maslov, M., Masuzaki, S., Matejcik, S., Mattei, M., Matthews, G. F., Matveev, D., Matveeva, E., Mauriya, A., Maviglia, F., Mayer, M., Mayoral, M. L., Mazzi, S., Mazzotta, C., McAdams, R., McCarthy, P. J., McClements, K. G., McClenaghan, J., McCullen, P., McDonald, D. C., McGuckin, D., McHugh, D., McIntyre, G., McKean, R., McKehon, J., McMillan, B., McNamee, L., McShee, A., Meakins, A., Medley, S., Meekes, C. J., Meghani, K., Meigs, A. G., Meisl, G., Meitner, S., Menmuir, S., Mergia, K., Merriman, S., Mertens, P., Meshchaninov, S., Messiaen, A., Michling, R., Middleton, P., Middleton-Gear, D., Mietelski, J., Milanesio, D., Milani, E., Militello, F., Asp, A. M., Milnes, J., Milocco, A., Miloshevsky, G., Minghao, C., Minucci, S., Miron, I., Miyamoto, M., Mlynář, J., Moiseenko, V., Monaghan, P., Monakhov, I., Moody, T., Moon, S., Mooney, R., Moradi, S., Morales, J., Morales, R. B., Mordijck, S., Moreira, L., Morgan, L., Moro, F., Morris, J., Morrison, K. M., Msero, L., Moulton, D., Mrowetz, T., Mundy, T., Muraglia, M., Murari, A., Muraro, A., Muthusonai, N., N'Konga, B., Na, Y. S., Nabais, F., Naden, M., Naish, J., Naish, R., Napoli, F., Nardon, E., Naulin, V., Nave, M. F. F., Nedzelskiy, I., Nemtsev, G., Nesenevich, V., Nestoras, I., Neu, R., Neverov, V. S., Ng, S., Nicassio, M., Nielsen, A. H., Nina, D., Nishijima, D., Noble, C., Nobs, C. R., Nocente, M., Nodwell, D., Nordlund, K., Nordman, H., Normanton, R., Noterdaeme, J. M., Nowak, S., Nunn, E., Nyström, H., Oberparleiter, M., Obryk, B., O'Callaghan, J., Odupitan, T., Oliver, H. J. C., Olney, R., O'Mullane, M., Ongena, J., Organ, E., Orsitto, F., Orszagh, J., Osborne, T., Otin, R., Otsuka, T., Owen, A., Oya, Y., Oyaizu, M., Paccagnella, R., Pace, N., Packer, L. W., Paige, S., Pajuste, E., Palade, D., Pamela, S. J. P., Panadero, N., Panontin, E., Papadopoulos, A., Papp, G., Papp, P., Parail, V. V., Pardanaud, C., Parisi, J., Diaz, F. P., Parsloe, A., Parsons, M., Parsons, N., Passeri, M., Patel, A., Pau, A., Pautasso, G., Pavlichenko, R., Pavone, A., Pawelec, E., Soldan, C. P., Peacock, A., Pearce, M., Peluso, E., Penot, C., Pepperell, K., Pereira, R., Pereira, T., Cippo, E. P., Pereslavtsev, P., Perez Von Thun, C., Pericoli, V., Perry, D., Peterka, M., Petersson, P., Petravich, G., Petrella, N., Peyman, M., Pillon, M., Pinches, S., Pintsuk, G., Pires De Sá, W., Pires Dos Reis, A., Piron, C., Pionr, L., Pironti, A., Pitts, R., Van De Plassche, K. L., Platt, N., Plyusnin, V., Podesta, M., Pokol, G., Poli, F. M., Pompilian, O. G., Popovichev, S., Poradziński, M., Porfiri, M. T., Porkolab, M., Porosnicu, C., Porton, M., Poulipoulis, G., Predebon, I., Prestopino, G., Price, C., Price, D., Price, M., Primetzhofer, D., Prior, P., Provatas, G., Pucella, G., Puglia, P., Purahoo, K., Pusztai, I., Putignano, O., Pütterich, T., Quercia, A., Rachlew, E., Radulescu, G., Radulovic, V., Rainford, M., Raj, P., Ralph, G., Ramogida, G., Rasmussen, D., Rasmussen, J. J., Rattá, G., Ratynskaia, S., Rebai, M., Réfy, D., Reichle, R., Reinke, M., Reiser, D., Reux, C., Reynolds, S., Richiusa, M. L., Richyal, S., Rigamonti, D., Rimini, F. G., Risner, J., Riva, M., Rivero-Rodriguez, J., Roach, C. M., Robins, R., Robinson, S., Robson, D., Rodionov, R., Rodrigues, P., Ramos, M. R., Rodriguez-Fernandez, P., Romanelli, F., Romanelli, M., Romanelli, S., Romazanov, J., Rossi, R., Rowe, S., Rowlands, D., Rubel, M., Rubinacci, G., Rubino, G., Ruchko, L., Ruiz, M., Ruiz, J. R., Ruset, C., Rzadkiewicz, J., Saarelma, S., Safi, E., Sahlberg, A., Salewski, M., Salmi, A., Salmon, R., Salzedas, F., Sanders, I., Sandiford, D., Santos, B., Santucci, A., Särkimäki, K., Sarwar, R., Sarychev, I., Sauter, O., Sauwan, P., Scapin, N., Schluck, F., Schmid, K., Schmuck, S., Schneider, M., Schneider, P. A., Schwörer, D., Scott, G., Scott, M., Scraggs, D., Scully, S., Segato, M., Seo, J., Sergienko, G., Sertoli, M., Sharapov, S. E., Shaw, A., Sheikh, H., Sheikh, U., Shepherd, A., Shevelev, A., Shigin, P., Shinohara, K., Shiraiwa, S., Shiraki, D., Short, M., Sias, G., Silburn, S. A., Silva, A., Silva, C., Silva, J., Silvagni, D., Simfukwe, D., Simpson, J., Sinclair, D., Sipilä, S. K., Sips, A. C. C., Sirén, P., Sirinelli, A., Sjöstrand, H., Skinner, N., Slater, J., Smith, N., Smith, P., Snell, J., Snoep, G., Snoj, L., Snyder, P., Soare, S., Solano, E. R., Solokha, V., Somers, A., Sommariva, C., Soni, K., Sorokovoy, E., Sos, M., Sousa, J., Sozzi, C., Spagnolo, S., Spelzini, T., Spineanu, F., Spong, D., Sprada, D., Sridhar, S., Srinivasan, C., Stables, G., Staebler, G., Stamatelatos, I., Stancar, Z., Staniec, P., Stankūnas, G., Stead, M., Stefanikova, E., Stephen, A., Stephens, J., Stevenson, P., Stojanov, M., Strand, P., Strauss, H. R., Strikwerda, S., Ström, P., Stuart, C. I., Studholme, W., Subramani, M., Suchkov, E., Sumida, S., Sun, H. J., Susts, T. E., Svensson, J., Svoboda, J., Sweeney, R., Sytnykov, D., Szabolics, T., Szepesi, G., Tabia, B., Tadić, T., Tál, B., Tala, T., Tallargio, A., Tamain, P., Tan, H., Tanaka, K., Tang, W., Tardocchi, M., Taylor, D., Teimane, A. S., Telesca, G., Teplova, N., Teplukhina, A., Terentyev, D., Terra, A., Terranova, D., Terranova, N., Testa, D., Tholerus, E., Thomas, J., Thoren, E., Thorman, A., Tierens, W., Tinguely, R. A., Tipton, A., Todd, H., Tokitani, M., Tolias, P., Tomeš, M., Tookey, A., Torikai, Y., Von Toussaint, U., Tsavalas, P., Tskhakaya, D., Turner, I., Turner, M., Turner, M. M., Turnyanskiy, M., Tvalashvili, G., Tyrrell, S., Tyshchenko, M., Uccello, A., Udintsev, V., Urbanczyk, G., Vadgama, A., Valcarcel, D., Valisa, M., Olivares, P. V., Vallhagen, O., Valovič, M., Van Eester, D., Varje, J., Vartanian, S., Vasilopoulou, T., Vayakis, G., Vecsei, M., Vega, J., Ventre, S., Verdoolaege, G., Verona, C., Rinati, G. V., Veshchev, E., Vianello, N., Viezzer, E., Vignitchouk, L., Vila, R., Villari, R., Villone, F., Vincenzi, P., Vinyar, I., Viola, B., Virtanen, A. J., Vitins, A., Vizvary, Z., Vlad, G., Vlad, M., Vondráček, P., Vries, P. D., Wakeling, B., Walkden, N. R., Walker, M., Walker, R., Walsh, M., Wang, E., Wang, N., Warder, S., Warren, R., Waterhouse, J., Watts, C., Wauters, T., Weckmann, A., Maxwell, H. W., Weiland, M., Weisen, H., Weiszflog, M., Welch, P., Wendler, N., West, A., Wheatley, M., Wheeler, S., Whitehead, A., Whittaker, D., Widdowson, A., Wiesen, S., Wilkinson, J., Williams, J. C., Willoughby, D., Wilson, I., Wilson, J., Wilson, T., Wischmeier, M., Wise, P., Withenshaw, G., Withycombe, A., Witts, D., Wojcik-Gargula, A., Wolfrum, E., Wood, R., Woodley, C., Woodley, R., Woods, B., Wright, J., Wright, J. C., Xu, T., Yadikin, D., Yajima, M., Yakovenko, Y., Yang, Y., Yanling, W., Yanovskiy, V., Young, I., Young, R., Zabolockis, R. J., Zacks, J., Zagorski, R., Zaitsev, F. S., Zakharov, L., Zarins, A., Fernandez, D. Z., Zastrow, K. D., Zayachuk, Y., Zerbini, M., Zhang, W., Zhou, Y., Zlobinski, M., Zocco, A., Zohar, A., Zoita, V., Zoletnik, S., Zotta, V. K., Zoulias, I., Zwingmann, W. & Zychor, I., Apr 2022, In: Nuclear Fusion. 62, 4, 042026.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    41 Scopus citations
  • Quality of Life and Limb Functionality in Adolescents and Young Adults Surviving Bone Tumors in the Lower Extremity in a Developing Country: A Cross-Sectional Study

    Vasquez, L., Tello, M., Maza, I., Shah, D., Silva, J. & Sialer, L., Oct 2022, In: Indian Journal of Medical and Paediatric Oncology. 43, 5, p. 404-408 5 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • Single-cell analysis reveals the Comma-1D cell line as a unique model for mammary gland development and breast cancer

    Werner, R. L., Nekritz, E. A., Yan, K. K., Ju, B., Shaner, B., Easton, J., Yu, J. & Silva, J., May 2022, In: Journal of Cell Science. 135, 10, jcs259329.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • Smurf2 inhibition enhances chemotherapy and radiation sensitivity in non-small-cell lung cancer

    Chaudhary, K. R., Kinslow, C. J., Cheng, H., Silva, J. M., Yu, J., Wang, T. J., Hei, T. K., Halmos, B. & Cheng, S. K., Dec 2022, In: Scientific Reports. 12, 1, 10140.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • 2021

    miR-424/503 modulates Wnt/β-catenin signaling in the mammary epithelium by targeting LRP6

    Nekritz, E. A., Rodriguez-Barrueco, R., Yan, K. K., Davis, M. L., Werner, R. L., Devis-Jauregui, L., Mukhopadhyay, P., Yu, J., Llobet-Navas, D. & Silva, J., 6 Dec 2021, In: EMBO Reports. 22, 12, e53201.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • Phase I/II trial of ruxolitinib in combination with trastuzumab in metastatic HER2 positive breast cancer

    Kearney, M., Franks, L., Lee, S., Tiersten, A., Makower, D. F., Cigler, T., Mundi, P., Chi, D. C., Goel, A., Klein, P., Andreopoulou, E., Sparano, J., Trivedi, M., Accordino, M., Califano, A., Hershman, D. L., Silva, J. & Kalinsky, K., Aug 2021, In: Breast Cancer Research and Treatment. 189, 1, p. 177-185 9 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    12 Scopus citations
  • Polycomb complexes redundantly maintain epidermal stem cell identity during development

    Cohen, I., Bar, C., Liu, H., Valdes, V. J., Zhao, D., Galbo, P. M., Silva, J. M., Koseki, H., Zheng, D. & Ezhkova, E., 1 Mar 2021, In: Genes and Development. 35, 5-6, p. 354-366 13 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    19 Scopus citations
  • The miR-424(322)/503 gene cluster regulates pro- versus anti-inflammatory skin DC subset differentiation by modulating TGF-β signaling

    Zyulina, V., Yan, K. K., Ju, B., Schwarzenberger, E., Passegger, C., Tam-Amersdorfer, C., Pan, Q., Sconocchia, T., Pollack, C., Shaner, B., Zebisch, A., Easton, J., Yu, J., Silva, J. M. & Strobl, H., 27 Apr 2021, In: Cell Reports. 35, 4, 109049.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    4 Scopus citations
  • UV-induced reduction in Polycomb repression promotes epidermal pigmentation

    Li, M. Y., Flora, P., Pu, H., Bar, C., Silva, J., Cohen, I., Galbo, P. M., Liu, H., Yu, X., Jin, J., Koseki, H., D'Orazio, J. A., Zheng, D. & Ezhkova, E., 27 Sep 2021, In: Developmental Cell. 56, 18, p. 2547-2561.e8

    Research output: Contribution to journalArticlepeer-review

    Open Access
    11 Scopus citations
  • 2020

    Prognostic impact of diagnostic and treatment delays in children with osteosarcoma

    Vasquez, L., Silva, J., Chavez, S., Zapata, A., Diaz, R., Tarrillo, F., Maza, I., Sialer, L. & García, J., 1 Apr 2020, In: Pediatric Blood and Cancer. 67, 4, e28180.

    Research output: Contribution to journalArticlepeer-review

    18 Scopus citations
  • 2019

    An IRAK1–PIN1 signalling axis drives intrinsic tumour resistance to radiation therapy

    Liu, P. H., Shah, R. B., Li, Y., Arora, A., Ung, P. M. U., Raman, R., Gorbatenko, A., Kozono, S., Zhou, X. Z., Brechin, V., Barbaro, J. M., Thompson, R., White, R. M., Aguirre-Ghiso, J. A., Heymach, J. V., Lu, K. P., Silva, J. M., Panageas, K. S., Schlessinger, A., Maki, R. G., & 3 othersSkinner, H. D., de Stanchina, E. & Sidi, S., 1 Feb 2019, In: Nature Cell Biology. 21, 2, p. 203-213 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    31 Scopus citations
  • Overview of the JET preparation for deuterium-tritium operation with the ITER like-wall

    Joffrin, E., Abduallev, S., Abhangi, M., Abreu, P., Afanasev, V., Afzal, M., Aggarwal, K. M., Ahlgren, T., Aho-Mantila, L., Aiba, N., Airila, M., Alarcon, T., Albanese, R., Alegre, D., Aleiferis, S., Alessi, E., Aleynikov, P., Alkseev, A., Allinson, M., Alper, B., & 1,231 othersAlves, E., Ambrosino, G., Ambrosino, R., Amosov, V., Andersson Sundén, E., Andrews, R., Angelone, M., Anghel, M., Angioni, C., Appel, L., Appelbee, C., Arena, P., Ariola, M., Arshad, S., Artaud, J., Arter, W., Ash, A., Ashikawa, N., Aslanyan, V., Asunta, O., Asztalos, O., Auriemma, F., Austin, Y., Avotina, L., Axton, M., Ayres, C., Baciero, A., Baiao, D., Balboa, I., Balden, M., Balshaw, N., Bandaru, V. K., Banks, J., Baranov, Y. F., Barcellona, C., Barnard, T., Barnes, M., Barnsley, R., Baron Wiechec, A., Barrera Orte, L., Baruzzo, M., Basiuk, V., Bassan, M., Bastow, R., Batista, A., Batistoni, P., Baumane, L., Bauvir, B., Baylor, L., Beaumont, P. S., Beckers, M., Beckett, B., Bekris, N., Beldishevski, M., Bell, K., Belli, F., Belonohy, E., Benayas, J., Bergsaker, H., Bernardo, J., Bernert, M., Berry, M., Bertalot, L., Besiliu, C., Betar, H., Beurskens, M., Bielecki, J., Biewer, T., Bilato, R., Biletskyi, O., Bilková, P., Binda, F., Birkenmeier, G., Bizarro, J. P. S., Björkas, C., Blackburn, J., Blackman, T. R., Blanchard, P., Blatchford, P., Bobkov, V., Boboc, A., Bogar, O., Bohm, P., Bohm, T., Bolshakova, I., Bolzonella, T., Bonanomi, N., Boncagni, L., Bonfiglio, D., Bonnin, X., Boom, J., Borba, D., Borodin, D., Borodkina, I., Boulbe, C., Bourdelle, C., Bowden, M., Bowman, C., Boyce, T., Boyer, H., Bradnam, S. C., Braic, V., Bravanec, R., Breizman, B., Brennan, D., Breton, S., Brett, A., Brezinsek, S., Bright, M., Brix, M., Broeckx, W., Brombin, M., Brosławski, A., Brown, B., Brunetti, D., Bruno, E., Buch, J., Buchanan, J., Buckingham, R., Buckley, M., Bucolo, M., Budny, R., Bufferand, H., Buller, S., Bunting, P., Buratti, P., Burckhart, A., Burroughes, G., Buscarino, A., Busse, A., Butcher, D., Butler, B., Bykov, I., Cahyna, P., Calabro, G., Calacci, L., Callaghan, D., Callaghan, J., Calvo, I., Camenen, Y., Camp, P., Campling, D. C., Cannas, B., Capat, A., Carcangiu, S., Card, P., Cardinali, A., Carman, P., Carnevale, D., Carr, M., Carralero, D., Carraro, L., Carvalho, B. B., Carvalho, I., Carvalho, P., Carvalho, D. D., Casson, F. J., Castaldo, C., Catarino, N., Causa, F., Cavazzana, R., Cave-Ayland, K., Cavedon, M., Cecconello, M., Ceccuzzi, S., Cecil, E., Challis, C. D., Chandra, D., Chang, C. S., Chankin, A., Chapman, I. T., Chapman, B., Chapman, S. 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R., Corradino, C., Corre, Y., Corrigan, G., Coster, D., Craciunescu, T., Cramp, S., Crapper, C., Crisanti, F., Croci, G., Croft, D., Crombé, K., Cruz, N., Cseh, G., Cufar, A., Cullen, A., Curson, P., Curuia, M., Czarnecka, A., Czarski, T., Cziegler, I., Dabirikhah, H., Dal Molin, A., Dalgliesh, P., Dalley, S., Dankowski, J., Darrow, D., David, P., Davies, A., Davis, W., Dawson, K., Day, I., Day, C., De Bock, M., De Castro, A., De Dominici, G., De La Cal, E., De La Luna, E., De Masi, G., De Temmerman, G., De Tommasi, G., De Vries, P., Deane, J., Dejarnac, R., Del Sarto, D., Delabie, E., Demerdzhiev, V., Dempsey, A., Den Harder, N., Dendy, R. O., Denis, J., Denner, P., Devaux, S., Devynck, P., Di Maio, F., Di Siena, A., Di Troia, C., Dickinson, D., Dinca, P., Dittmar, T., Dobrashian, J., Doerk, H., Doerner, R. P., Domptail, F., Donné, T., Dorling, S. 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M., Formisano, A., Forsythe, L., Fortuna, L., Fransson, E., Frasca, M., Frassinetti, L., Freisinger, M., Fresa, R., Fridström, R., Frigione, D., Fuchs, V., Fusco, V., Futatani, S., Gál, K., Galassi, D., Gałazka, K., Galeani, S., Gallart, D., Galvao, R., Gao, Y., Garcia, J., Garcia-Carrasco, A., Garcia-Munoz, M., Gardener, M., Garzotti, L., Gaspar, J., Gaudio, P., Gear, D., Gebhart, T., Gee, S., Geiger, B., Gelfusa, M., George, R., Gerasimov, S., Gervasini, G., Gethins, M., Ghani, Z., Ghate, M., Gherendi, M., Ghezzi, F., Giacalone, J. C., Giacomelli, L., Giacometti, G., Gibson, K., Giegerich, T., Gil, L., Gilbert, M. R., Gin, D., Giovannozzi, E., Giroud, C., Glöggler, S., Goff, J., Gohil, P., Goloborod'Ko, V., Goloborodko, V., Gomes, R., Goncalves, B., Goniche, M., Goodyear, A., Gorini, G., Görler, T., Goulding, R., Goussarov, A., Graham, B., Graves, J. 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D., Sergienko, G., Sertoli, M., Shabbir, A., Sharapov, S. E., Shaw, A., Sheikh, H., Shepherd, A., Shevelev, A., Shiraki, D., Shumack, A., Sias, G., Sibbald, M., Sieglin, B., Silburn, S., Silva, J., Silva, A., Silva, C., Silvagni, D., Simmons, P., Simpson, J., Sinha, A., Sipila, S. K., Sips, A. C. C., Sirén, P., Sirinelli, A., Sjöstrand, H., Skiba, M., Skilton, R., Skvara, V., Slade, B., Smith, R., Smith, P., Smith, S. F., Snoj, L., Soare, S., Solano, E. R., Somers, A., Sommariva, C., Sonato, P., Sos, M., Sousa, J., Sozzi, C., Spagnolo, S., Sparapani, P., Spelzini, T., Spineanu, F., Sprada, D., Sridhar, S., Stables, G., Stallard, J., Stamatelatos, I., Stamp, M. F., Stan-Sion, C., Stancar, Z., Staniec, P., Stankūnas, G., Stano, M., Stavrou, C., Stefanikova, E., Stepanov, I., Stephen, A. V., Stephen, M., Stephens, J., Stevens, B., Stober, J., Stokes, C., Strachan, J., Strand, P., Strauss, H. R., Ström, P., Studholme, W., Subba, F., Suchkov, E., Summers, H. 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J., Varje, J., Vartanian, S., Vasava, K., Vasilopoulou, T., Vecsei, M., Vega, J., Ventre, S., Verdoolaege, G., Verona, C., Verona Rinati, G., Veshchev, E., Vianello, N., Vicente, J., Viezzer, E., Villari, S., Villone, F., Vincent, M., Vincenzi, P., Vinyar, I., Viola, B., Vitins, A., Vizvary, Z., Vlad, M., Voitsekhovitch, I., Voltolina, D., Von Toussaint, U., Vondráček, P., Vuksic, M., Wakeling, B., Waldon, C., Walkden, N., Walker, R., Walker, M., Walsh, M., Wang, N., Wang, E., Wang, N., Warder, S., Warren, R., Waterhouse, J., Watts, C., Wauters, T., Webb, M., Weckmann, A., Weiland, J., Weiland, M., Weisen, H., Weiszflog, M., Welch, P., West, A., Wheatley, M., Wheeler, S., Whitehead, A. M., Whittaker, D., Widdowson, A. M., Wiesen, S., Wilkie, G., Williams, J., Willoughby, D., Wilson, J., Wilson, I., Wilson, H. R., Wischmeier, M., Withycombe, A., Witts, D., Wolfrum, E., Wood, R., Woodley, R., Woodley, C., Wray, S., Wright, J. C., Wright, P., Wukitch, S., Wynn, A., Xiang, L., Xu, T., Xue, Y., Yadikin, D., Yakovenko, Y., Yanling, W., Yavorskij, V., Young, I., Young, R., Young, D., Zacks, J., Zagorski, R., Zaitsev, F. S., Zakharov, L., Zanino, R., Zarins, A., Zarins, R., Zarzoso Fernandez, D., Zastrow, K. D., Zerbini, M., Zhang, W., Zhou, Y., Zilli, E., Zocco, A., Zoita, V., Zoletnik, S., Zwingmann, W. & Zychor, I., 30 Aug 2019, In: Nuclear Fusion. 59, 11, 112021.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    95 Scopus citations
  • Transformed bone marrow cells generate neoplasms of distinct histogenesis. a murine model of cancer transplantation

    Castillo-Martin, M., Gladoun, N., Han, D., Firpo-Betancourt, A., Silva, J. M. & Cordon-Cardo, C., Dec 2019, In: Stem Cell Research. 41, 101637.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • 2018

    Bayesian network to infer drug-induced apoptosis circuits from connectivity map data

    Yu, J. & Silva, J. M., 2018, Methods in Molecular Biology. Humana Press Inc., p. 361-378 18 p. (Methods in Molecular Biology; vol. 1783).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    2 Scopus citations
  • Cross-cohort analysis identifies a TEAD4–MYCN positive feedback loop as the core regulatory element of high-risk neuroblastoma

    Rajbhandari, P., Lopez, G., Capdevila, C., Salvatori, B., Yu, J., Rodriguez-Barrueco, R., Martinez, D., Yarmarkovich, M., Weichert-Leahey, N., Abraham, B. J., Alvarez, M. J., Iyer, A., Harenza, J. L., Oldridge, D., de Preter, K., Koster, J., Asgharzadeh, S., Seeger, R. C., Wei, J. S., Khan, J., & 10 othersVandesompele, J., Mestdagh, P., Versteeg, R., Look, A. T., Young, R. A., Iavarone, A., Lasorella, A., Silva, J. M., Maris, J. M. & Califano, A., May 2018, In: Cancer Discovery. 8, 5, p. 582-599 18 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    89 Scopus citations
  • The number of titrated microRNA species dictates ceRNA regulation

    Chiu, H. S., Martínez, M. R., Komissarova, E. V., Llobet-Navas, D., Bansal, M., Paull, E. O., Silva, J., Yang, X., Sumazin, P. & Califano, A., May 2018, In: Nucleic Acids Research. 46, 9, p. 4354-4369 16 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    29 Scopus citations
  • Transcription factor activating protein 4 is synthetically lethal and a master regulator of MYCN-amplified neuroblastoma

    Boboila, S., Lopez, G., Yu, J., Banerjee, D., Kadenhe-Chiweshe, A., Connolly, E. P., Kandel, J. J., Rajbhandari, P., Silva, J. M., Califano, A. & Yamashiro, D. J., 4 Oct 2018, In: Oncogene. 37, 40, p. 5451-5465 15 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    18 Scopus citations
  • 2017

    Erratum: HDAC6 activity is a non-oncogene addiction hub for inflammatory breast cancers[Breast Cancer Res,17 (2015)(149)] DOI:10.1186/s13058-015-0658-0

    Putcha, P., Yu, J., Rodriguez-Barrueco, R., Saucedo-Cuevas, L., Villagrasa, P., Murga-Penas, E., Quayle, S. N., Yang, M., Castro, V., Llobet-Navas, D., Birnbaum, D., Finetti, P., Woodward, W. A., Bertucci, F., Alpaugh, M. L., Califano, A. & Silva, J., 19 Apr 2017, In: Breast Cancer Research. 19, 1, 49.

    Research output: Contribution to journalComment/debate

    Open Access
    1 Scopus citations
  • miR-424(322)/503 is a breast cancer tumor suppressor whose loss promotes resistance to chemotherapy

    Rodriguez-Barrueco, R., Nekritz, E. A., Bertucci, F., Yu, J., Sanchez-Garcia, F., Zeleke, T. Z., Gorbatenko, A., Birnbaum, D., Ezhkova, E., Cordon-Cardo, C., Finetti, P., Llobet-Navas, D. & Silva, J. M., 15 Mar 2017, In: Genes and Development. 31, 6, p. 553-566 14 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    77 Scopus citations
  • 2016

    Analysis of prognostic factors in high-grade osteosarcoma of the extremities in children: A 15-year single-institution experience

    Vasquez, L., Tarrillo, F., Oscanoa, M., Maza, I., Geronimo, J., Paredes, G., Silva, J. M. & Sialer, L., 2016, In: Frontiers in Oncology. 6, FEB, 22.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    41 Scopus citations
  • Functional genomics screen identifies YAP1 as a key determinant to enhance treatment sensitivity in lung cancer cells

    Cheng, H., Zhang, Z., Rodriguez-Barrueco, R. R., Borczuk, A., Liu, H., Yu, J., Silva, J. M., Cheng, S. K., Perez-Soler, R. & Halmos, B., 17 May 2016, In: Oncotarget. 7, 20, p. 28976-28988 13 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    72 Scopus citations
  • ScreenBEAM: A novel meta-analysis algorithm for functional genomics screens via Bayesian hierarchical modeling

    Yu, J., Silva, J. & Califano, A., 15 Jan 2016, In: Bioinformatics. 32, 2, p. 260-267 8 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    30 Scopus citations
  • 2015

    A Targetable GATA2-IGF2 Axis Confers Aggressiveness in Lethal Prostate Cancer

    Vidal, S. J., Rodriguez-Bravo, V., Quinn, S. A., Rodriguez-Barrueco, R., Lujambio, A., Williams, E., Sun, X., delaIglesia-Vicente, J., Lee, A., Readhead, B., Chen, X., Galsky, M., Esteve, B., Petrylak, D. P., Dudley, J. T., Rabadan, R., Silva, J. M., Hoshida, Y., Lowe, S. W., Cordon-Cardo, C., & 1 othersDomingo-Domenech, J., 9 Feb 2015, In: Cancer Cell. 27, 2, p. 223-239 17 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    107 Scopus citations
  • Cupid: Simultaneous reconstruction of micrornatarget and cerna networks

    Chiu, H. S., Llobet-Navas, D., Yang, X., Chung, W. J., Ambesi-Impiombato, A., Iyer, A., Kim, H. R., Seviour, E. G., Luo, Z., Sehgal, V., Moss, T., Lu, Y., Ram, P., Silva, J., Mills, G. B., Califano, A. & Sumazin, P., 1 Feb 2015, In: Genome Research. 25, 2, p. 257-267 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    81 Scopus citations
  • HDAC6 activity is a non-oncogene addiction hub for inflammatory breast cancers

    Putcha, P., Yu, J., Rodriguez-Barrueco, R., Saucedo-Cuevas, L., Villagrasa, P., Murga-Penas, E., Quayle, S. N., Yang, M., Castro, V., Llobet-Navas, D., Birnbaum, D., Finetti, P., Woodward, W. A., Bertucci, F., Alpaugh, M. L., Califano, A. & Silva, J., 8 Dec 2015, In: Breast Cancer Research. 17, 1, 149.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    37 Scopus citations
  • Inhibition of the autocrine IL-6–JAK2–STAT3–calprotectin axis as targeted therapy for HR−/HER2+ breast cancers

    Rodriguez-Barrueco, R., Yu, J., Saucedo-Cuevas, L. P., Olivan, M., Llobet-Navas, D., Putcha, P., Castro, V., Murga-Penas, E. M., Collazo-Lorduy, A., Castillo-Martin, M., Alvarez, M., Cordon-Cardo, C., Kalinsky, K., Maurer, M., Califano, A. & Silva, J. M., 1 Aug 2015, In: Genes and Development. 29, 15, p. 1631-1648 18 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    82 Scopus citations
  • MYC is a critical target of FBXW7

    Sato, M., Rodriguez-Barrueco, R., Yu, J., Do, C., Silva, J. M. & Gautier, J., 2015, In: Oncotarget. 6, 5, p. 3292-3305 14 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    36 Scopus citations
  • Recovering drug-induced apoptosis subnetwork from connectivity map data

    Yu, J., Putcha, P. & Silva, J. M., 2015, In: BioMed Research International. 2015, 708563.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    10 Scopus citations
  • SEC14L2 enables pan-genotype HCV replication in cell culture

    Saeed, M., Andreo, U., Chung, H. Y., Espiritu, C., Branch, A. D., Silva, J. M. & Rice, C. M., 27 Aug 2015, In: Nature. 524, 7566, p. 471-475 5 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    104 Scopus citations
  • The tumor suppressor NKX3.1 is targeted for degradation by DYRK1B kinase

    Song, L. N., Silva, J., Koller, A., Rosenthal, A., Chen, E. I. & Gelmann, E. P., 1 May 2015, In: Molecular Cancer Research. 13, 5, p. 913-922 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    18 Scopus citations
  • 2014

    CUL4A contributes to the biology of basal-like breast tumors through modulation of cell growth and antitumor immune response

    Saucedo-Cuevas, L. P., Ruppen, I., Ximénez-Embún, P., Domingo, S., Gayarre, J., Muñoz, J., Silva, J. M., García, M. J. & Benítez, J., Apr 2014, In: Oncotarget. 5, 8, p. 2330-2343 14 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    16 Scopus citations
  • Double-stranded DNA in exosomes: A novel biomarker in cancer detection

    Thakur, B. K., Zhang, H., Becker, A., Matei, I., Huang, Y., Costa-Silva, B., Zheng, Y., Hoshino, A., Brazier, H., Xiang, J., Williams, C., Rodriguez-Barrueco, R., Silva, J. M., Zhang, W., Hearn, S., Elemento, O., Paknejad, N., Manova-Todorova, K., Welte, K., Bromberg, J., & 2 othersPeinado, H. & Lyden, D., Jun 2014, In: Cell Research. 24, 6, p. 766-769 4 p.

    Research output: Contribution to journalLetterpeer-review

    Open Access
    1221 Scopus citations
  • Integration of Genomic Data Enables Selective Discovery of Breast Cancer Drivers

    Sanchez-Garcia, F., Villagrasa, P., Matsui, J., Kotliar, D., Castro, V., Akavia, U. D., Chen, B. J., Saucedo-Cuevas, L., Rodriguez Barrueco, R., Llobet-Navas, D., Silva, J. M. & Pe'Er, D., 4 Dec 2014, In: Cell. 159, 6, p. 1461-1475 15 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    73 Scopus citations
  • MicroRNA-126 inhibits invasion in bladder cancer via regulation of ADAM9

    Jia, A. Y., Castillo-Martin, M., Bonal, D. M., Sánchez-Carbayo, M., Silva, J. M. & Cordon-Cardo, C., 10 Jun 2014, In: British Journal of Cancer. 110, 12, p. 2945-2954 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    63 Scopus citations
  • The microRNA 424/503 cluster reduces CDC25A expression during cell cycle arrest imposed by transforming growth factor β in mammary epithelial cells

    Llobet-Navas, D., Rodriguez-Barrueco, R., de La Iglesia-Vicente, J., Olivan, M., Castro, V., Saucedo-Cuevas, L., Marshall, N., Putcha, P., Castillo-Martin, M., Bardot, E., Ezhkova, E., Iavarone, A., Cordon-Cardo, C. & Silva, J. M., 2014, In: Molecular and Cellular Biology. 34, 23, p. 4216-4231 16 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    34 Scopus citations
  • The miR-424(322)/503 cluster orchestrates remodeling of the epithelium in the involuting mammary gland

    Llobet-Navas, D., Rodríguez-Barrueco, R., Castro, V., Ugalde, A. P., Sumazin, P., Jacob-Sendler, D., Demircan, B., Castillo-Martín, M., Putcha, P., Marshall, N., Villagrasa, P., Chan, J., Sanchez-Garcia, F., Pe'er, D., Rabadán, R., Iavarone, A., Cordón-Cardó, C., Califano, A., López-Otín, C., Ezhkova, E., & 1 othersSilva, J. M., 1 Apr 2014, In: Genes and Development. 28, 7, p. 765-782 18 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    56 Scopus citations
  • 2013

    A common MicroRNA signature consisting of miR-133a, miR-139-3p, and miR-142-3p clusters bladder carcinoma in situ with normal umbrella cells

    Jia, A. Y., Castillo-Martin, M., Domingo-Domenech, J., Bonal, D. M., Sánchez-Carbayo, M., Silva, J. M. & Cordon-Cardo, C., Apr 2013, In: American Journal of Pathology. 182, 4, p. 1171-1179 9 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    25 Scopus citations
  • An in vivo RNAi screening approach to identify host determinants of virus Replication

    Varble, A., Benitez, A. A., Schmid, S., Sachs, D., Shim, J. V., Rodriguez-Barrueco, R., Panis, M., Crumiller, M., Silva, J. M., Sachidanandam, R. & Tenoever, B. R., 11 Sep 2013, In: Cell Host and Microbe. 14, 3, p. 346-356 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    35 Scopus citations
  • Polycomb subunits Ezh1 and Ezh2 regulate the Merkel cell differentiation program in skin stem cells

    Bardot, E. S., Valdes, V. J., Zhang, J., Perdigoto, C. N., Nicolis, S., Hearn, S. A., Silva, J. M. & Ezhkova, E., 17 Jul 2013, In: EMBO Journal. 32, 14, p. 1990-2000 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    100 Scopus citations
  • Pooled shRNA screenings: Experimental approach

    Rodriguez-Barrueco, R., Marshall, N. & Silva, J. M., 2013, Pancreatic Cancer: Methods and Protocols. Humana Press Inc., p. 353-370 18 p. (Methods in Molecular Biology; vol. 980).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    12 Scopus citations
  • Pooled ShRNA screenings: Computational analysis

    Yu, J., Putcha, P., Califano, A. & Silva, J. M., 2013, Pancreatic Cancer: Methods and Protocols. Humana Press Inc., p. 371-384 14 p. (Methods in Molecular Biology; vol. 980).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    7 Scopus citations
  • 2012

    Mutant p53 disrupts mammary tissue architecture via the mevalonate pathway

    Freed-Pastor, W. A., Mizuno, H., Zhao, X., Langerød, A., Moon, S. H., Rodriguez-Barrueco, R., Barsotti, A., Chicas, A., Li, W., Polotskaia, A., Bissell, M. J., Osborne, T. F., Tian, B., Lowe, S. W., Silva, J. M., Børresen-Dale, A. L., Levine, A. J., Bargonetti, J. & Prives, C., 20 Jan 2012, In: Cell. 148, 1-2, p. 244-258 15 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    681 Scopus citations