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20022023

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ASSISTANT PROFESSOR | Genetics and Genomic Sciences

Biography

Harm van Bakel's research is focused on understanding genome architecture, transcription regulation and coding- and non-coding RNA biology, with an emphasis on their relationship to disease. He uses a combination of Molecular Biology and Bioinformatics approaches to tackle these questions. Multi-Disciplinary Training Area Genetics and Genomic Sciences [GGS] Education MS, University of Utrecht PhD, University of Utrecht

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  • Evaluation and validation of an RT-PCR assay for specific detection of monkeypox virus (MPXV)

    Paniz-Mondolfi, A., Guerra, S., Muñoz, M., Luna, N., Hernandez, M. M., Patino, L. H., Reidy, J., Banu, R., Shrestha, P., Liggayu, B., Umeaku, A., Chen, F., Cao, L., Patel, A., Hanna, A., Li, S., Look, A., Pagani, N., Albrecht, R., Pearl, R., & 24 othersGarcia-Sastre, A., Bogunovic, D., Palacios, G., Bonnier, L., Cera, F., Lopez, H., Calderon, Y., Eiting, E., Mullen, K., Shin, S. J., Lugo, L. A., Urbina, A. E., Starks, C., Koo, T., Uychiat, P., Look, A., van Bakel, H., Gonzalez-Reiche, A., Betancourt, A. F., Reich, D., Cordon-Cardo, C., Simon, V., Sordillo, E. M. & Ramírez, J. D., Jan 2023, In: Journal of Medical Virology. 95, 1, e28247.

    Research output: Contribution to journalArticlepeer-review

    1 Scopus citations
  • Activity of convalescent and vaccine serum against SARS-CoV-2 Omicron

    PSP-PARIS Study Group, 24 Feb 2022, In: Nature. 602, 7898, p. 682-688 7 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    185 Scopus citations
  • Antibodies targeting the neuraminidase active site inhibit influenza H3N2 viruses with an S245N glycosylation site

    Stadlbauer, D., McMahon, M., Turner, H. L., Zhu, X., Wan, H., Carreño, J. M., O’Dell, G., Strohmeier, S., Khalil, Z., Luksza, M., van Bakel, H., Simon, V., Ellebedy, A. H., Wilson, I. A., Ward, A. B. & Krammer, F., Dec 2022, In: Nature Communications. 13, 1, 7864.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • A Robust, Highly Multiplexed Mass Spectrometry Assay to Identify SARS-CoV-2 Variants

    Mount Sinai PSP Study Group, Sep 2022, In: Microbiology spectrum. 10, 5

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Defining the risk of SARS-CoV-2 variants on immune protection

    DeGrace, M. M., Ghedin, E., Frieman, M. B., Krammer, F., Grifoni, A., Alisoltani, A., Alter, G., Amara, R. R., Baric, R. S., Barouch, D. H., Bloom, J. D., Bloyet, L. M., Bonenfant, G., Boon, A. C. M., Boritz, E. A., Bratt, D. L., Bricker, T. L., Brown, L., Buchser, W. J., Carreño, J. M., & 110 othersCohen-Lavi, L., Darling, T. L., Davis-Gardner, M. E., Dearlove, B. L., Di, H., Dittmann, M., Doria-Rose, N. A., Douek, D. C., Drosten, C., Edara, V. V., Ellebedy, A., Fabrizio, T. P., Ferrari, G., Fischer, W. M., Florence, W. C., Fouchier, R. A. M., Franks, J., García-Sastre, A., Godzik, A., Gonzalez-Reiche, A. S., Gordon, A., Haagmans, B. L., Halfmann, P. J., Ho, D. D., Holbrook, M. R., Huang, Y., James, S. L., Jaroszewski, L., Jeevan, T., Johnson, R. M., Jones, T. C., Joshi, A., Kawaoka, Y., Kercher, L., Koopmans, M. P. G., Korber, B., Koren, E., Koup, R. A., LeGresley, E. B., Lemieux, J. E., Liebeskind, M. J., Liu, Z., Livingston, B., Logue, J. P., Luo, Y., McDermott, A. B., McElrath, M. J., Meliopoulos, V. A., Menachery, V. D., Montefiori, D. C., Mühlemann, B., Munster, V. J., Munt, J. E., Nair, M. S., Netzl, A., Niewiadomska, A. M., O’Dell, S., Pekosz, A., Perlman, S., Pontelli, M. C., Rockx, B., Rolland, M., Rothlauf, P. W., Sacharen, S., Scheuermann, R. H., Schmidt, S. D., Schotsaert, M., Schultz-Cherry, S., Seder, R. A., Sedova, M., Sette, A., Shabman, R. S., Shen, X., Shi, P. Y., Shukla, M., Simon, V., Stumpf, S., Sullivan, N. J., Thackray, L. B., Theiler, J., Thomas, P. G., Trifkovic, S., Türeli, S., Turner, S. A., Vakaki, M. A., van Bakel, H., VanBlargan, L. A., Vincent, L. R., Wallace, Z. S., Wang, L., Wang, M., Wang, P., Wang, W., Weaver, S. C., Webby, R. J., Weiss, C. D., Wentworth, D. E., Weston, S. M., Whelan, S. P. J., Whitener, B. M., Wilks, S. H., Xie, X., Ying, B., Yoon, H., Zhou, B., Hertz, T., Smith, D. J., Diamond, M. S., Post, D. J. & Suthar, M. S., 26 May 2022, In: Nature. 605, 7911, p. 640-652 13 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    23 Scopus citations