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1995 …2024

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  • 2024

    A monoclonal antibody targeting the Nipah virus fusion glycoprotein apex imparts protection from disease

    Avanzato, V. A., Bushmaker, T., Oguntuyo, K. Y., Yinda, C. K., Duyvesteyn, H. M. E., Stass, R., Meade-White, K., Rosenke, R., Thomas, T., van Doremalen, N., Saturday, G., Doores, K. J., Lee, B., Bowden, T. A. & Munster, V. J., 22 Oct 2024, In: Journal of Virology. 98, 10, p. e0063824

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • An in vitro experimental pipeline to characterize the epitope of a SARS-CoV-2 neutralizing antibody

    Atanasoff, K. E., Brambilla, L., Adelsberg, D. C., Kowdle, S., Stevens, C. S., Slamanig, S., Hung, C. T., Fu, Y., Lim, R., Tran, L., Allen, R., Sun, W., Duty, J. A., Bajic, G., Lee, B. & Tortorella, D., Jan 2024, In: mBio. 15, 1

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • Functional properties of measles virus proteins derived from a subacute sclerosing panencephalitis patient who received repeated remdesivir treatments

    Schmitz, K. S., Handrejk, K., Liepina, L., Bauer, L., Haas, G. D., van Puijfelik, F., Veldhuis Kroeze, E. J. B., Riekstina, M., Strautmanis, J., Cao, H., Verdijk, R. M., GeurtsvanKessel, C. H., van Boheemen, S., van Riel, D., Lee, B., Porotto, M., de Swart, R. L. & de Vries, R. D., Mar 2024, In: Journal of Virology. 98, 3

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • Heterologous Ad26/Ad5 adenovirus-vectored vaccines elicited SARS-CoV-2-specific antibody responses with potent Fc activities

    Klingler, J., Kowdle, S., Bandres, J. C., Emami-Gorizi, R., Alvarez, R. A., Rao, P. G., Amanat, F., Gleason, C., Kleiner, G., Simon, V., Edelstein, A., Perandones, C., Upadhyay, C., Lee, B. & Hioe, C. E., 2024, In: Frontiers in Immunology. 15, 1382619.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Immunological landscape of human lymphoid explants during measles virus infection

    Acklin, J. A., Patel, A. R., Kurland, A. P., Horiuchi, S., Moss, A. S., DeGrace, E. J., Ikegame, S., Carmichael, J., Kowdle, S., Thibault, P. A., Imai, N., Ueno, H., Tweel, B., Johnson, J. R., Rosenberg, B. R., Lee, B. & Lim, J. K., 10 Sep 2024, In: JCI insight. 9, 17, e172261.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Intranasal SARS-CoV-2 Omicron variant vaccines elicit humoral and cellular mucosal immunity in female mice

    Slamanig, S., González-Domínguez, I., Chang, L. A., Lemus, N., Lai, T. Y., Martínez, J. L., Singh, G., Dolange, V., Abdeljawad, A., Kowdle, S., Noureddine, M., Warang, P., Lee, B., García-Sastre, A., Krammer, F., Schotsaert, M., Palese, P. & Sun, W., Jul 2024, In: eBioMedicine. 105, 105185.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • Structure-guided mutagenesis of Henipavirus receptor-binding proteins reveals molecular determinants of receptor usage and antibody-binding epitopes

    Oguntuyo, K. Y., Haas, G. D., Azarm, K. D., Stevens, C. S., Brambilla, L., Kowdle, S. S., Avanzato, V. A., Pryce, R., Freiberg, A. N., Bowden, T. A. & Lee, B., Mar 2024, In: Journal of Virology. 98, 3

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Tetracistronic minigenomes elucidate a functional promoter for Ghana virus and unveils Cedar virus replicase promiscuity for all henipaviruses

    Haas, G. D., Kowdle, S., Schmitz, K. S., Azarm, K. D., Johnson, K. N., Klain, W. R., Freiberg, A. N., Cox, R. M., Plemper, R. K. & Lee, B., 22 Oct 2024, In: Journal of Virology. 98, 10, p. e0080624

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • 2023

    Crystal structure and solution state of the C-terminal head region of the narmovirus receptor binding protein

    Stelfox, A. J., Oguntuyo, K. Y., Rissanen, I., Harlos, K., Rambo, R., Lee, B. & Bowden, T. A., Oct 2023, In: mBio. 14, 5

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Metagenomics-enabled reverse-genetics assembly and characterization of myotis bat morbillivirus

    Ikegame, S., Carmichael, J. C., Wells, H., Furler O’Brien, R. L., Acklin, J. A., Chiu, H. P., Oguntuyo, K. Y., Cox, R. M., Patel, A. R., Kowdle, S., Stevens, C. S., Eckley, M., Zhan, S., Lim, J. K., Veit, E. C., Evans, M. J., Hashiguchi, T., Durigon, E., Schountz, T. & Epstein, J. H. & 4 others, Plemper, R. K., Daszak, P., Anthony, S. J. & Lee, B., Jun 2023, In: Nature Microbiology. 8, 6, p. 1108-1122 15 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    4 Scopus citations
  • Nipah Virus Bangladesh Infection Elicits Organ-Specific Innate and Inflammatory Responses in the Marmoset Model

    Stevens, C. S., Lowry, J., Juelich, T., Atkins, C., Johnson, K., Smith, J. K., Panis, M., Ikegami, T., Tenoever, B., Freiberg, A. N. & Lee, B., 1 Sep 2023, In: Journal of Infectious Diseases. 228, 5, p. 604-614 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • 2022

    Classification of new morbillivirus and jeilongvirus sequences from bats sampled in Brazil and Malaysia

    Wells, H. L., Loh, E., Nava, A., Solorio, M. R., Lee, M. H., Lee, J., Sukor, J. R. A., Navarrete-Macias, I., Liang, E., Firth, C., Epstein, J. H., Rostal, M. K., Zambrana-Torrelio, C., Murray, K., Daszak, P., Goldstein, T., Mazet, J. A. K., Lee, B., Hughes, T. & Durigon, E. & 1 others, Anthony, S. J., Oct 2022, In: Archives of Virology. 167, 10, p. 1977-1987 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    11 Scopus citations
  • Discovery and intranasal administration of a SARS-CoV-2 broadly acting neutralizing antibody with activity against multiple Omicron subvariants

    Duty, J. A., Kraus, T., Zhou, H., Zhang, Y., Shaabani, N., Yildiz, S., Du, N., Singh, A., Miorin, L., Li, D., Stegman, K., Ophir, S., Cao, X., Atanasoff, K., Lim, R., Mena, I., Bouvier, N. M., Kowdle, S., Carreño, J. M. & Rivero-Nava, L. & 29 others, Raskin, A., Moreno, E., Johnson, S., Rathnasinghe, R., Pai, C. I., Kehrer, T., Cabral, E. P., Jangra, S., Healy, L., Singh, G., Warang, P., Simon, V., Sordillo, E. M., van Bakel, H., Liu, Y., Sun, W., Kerwin, L., Teijaro, J., Schotsaert, M., Krammer, F., Bresson, D., García-Sastre, A., Fu, Y., Lee, B., Powers, C., Moran, T., Ji, H., Tortorella, D. & Allen, R., 14 Oct 2022, In: Med. 3, 10, p. 705-721.e11

    Research output: Contribution to journalArticlepeer-review

    Open Access
    8 Scopus citations
  • Gut microbiota-derived metabolites confer protection against SARS-CoV-2 infection

    Brown, J. A., Sanidad, K. Z., Lucotti, S., Lieber, C. M., Cox, R. M., Ananthanarayanan, A., Basu, S., Chen, J., Shan, M., Amir, M., Schmidt, F., Weisblum, Y., Cioffi, M., Li, T., Rowdo, F. M., Martin, M. L., Guo, C. J., Lyssiotis, C., Layden, B. T. & Dannenberg, A. J. & 6 others, Bieniasz, P. D., Lee, B., Inohara, N., Matei, I., Plemper, R. K. & Zeng, M. Y., 2022, In: Gut Microbes. 14, 1, 2105609.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    30 Scopus citations
  • Immune profiles to distinguish hospitalized versus ambulatory COVID-19 cases in older patients

    Klingler, J., Lambert, G. S., Bandres, J. C., Emami-Gorizi, R., Nádas, A., Oguntuyo, K. Y., Amanat, F., Bermúdez-González, M. C., Gleason, C., Kleiner, G., Simon, V., Lee, B., Zolla-Pazner, S., Upadhyay, C. & Hioe, C. E., 22 Dec 2022, In: iScience. 25, 12, 105608.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    2 Scopus citations
  • Long-term analysis of antibodies elicited by SPUTNIK V: A prospective cohort study in Tucumán, Argentina

    Chahla, R. E., Tomas-Grau, R. H., Cazorla, S. I., Ploper, D., Vera Pingitore, E., López, M. A., Aznar, P., Alcorta, M. E., Vélez, E. M. D. M., Stagnetto, A., Ávila, C. L., Maldonado-Galdeano, C., Socias, S. B., Heinze, D., Navarro, S. A., Llapur, C. J., Costa, D., Flores, I., Edelstein, A. & Kowdle, S. & 7 others, Perandones, C., Lee, B., Apfelbaum, G., Mostoslavsky, R., Mostoslavsky, G., Perdigón, G. & Chehín, R. N., Feb 2022, In: The Lancet Regional Health - Americas. 6, 100123.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    35 Scopus citations
  • Measles and Nipah virus assembly: Specific lipid binding drives matrix polymerization

    Norris, M. J., Husby, M. L., Kiosses, W. B., Yin, J., Saxena, R., Rennick, L. J., Heiner, A., Harkins, S. S., Pokhrel, R., Schendel, S. L., Hastie, K. M., Landeras-Bueno, S., Salie, Z. L., Lee, B., Chapagain, P. P., Maisner, A., Paul Duprex, W., Stahelin, R. V. & Saphire, E. O., Jul 2022, In: Science advances. 8, 29, eabn1440.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    12 Scopus citations
  • Quantifying Neutralizing Antibodies in Patients with COVID-19 by a Two-Variable Generalized Additive Model

    Liu, K. T., Gong, Y. N., Huang, C. G., Huang, P. N., Yu, K. Y., Lee, H. C., Lee, S. C., Chiang, H. J., Kung, Y. A., Lin, Y. T., Hsiao, M. J., Huang, P. W., Huang, S. Y., Wu, H. T., Wu, C. C., Kuo, R. L., Chen, K. F., Hung, C. T., Oguntuyo, K. Y. & Stevens, C. S. & 5 others, Kowdle, S., Chiu, H. P., Lee, B., Chen, G. W. & Shih, S. R., Feb 2022, In: mSphere. 7, 1, e00883-21.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    10 Scopus citations
  • Single-virus assay reveals membrane determinants and mechanistic features of Sendai virus binding

    Lam, A., Kirkland, O. O., Anderson, P. F., Seetharaman, N., Vujovic, D., Thibault, P. A., Azarm, K. D., Lee, B. & Rawle, R. J., 15 Mar 2022, In: Biophysical Journal. 121, 6, p. 956-965 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    8 Scopus citations
  • Suppressing fatty acid synthase by type I interferon and chemical inhibitors as a broad spectrum anti-viral strategy against SARS-CoV-2

    Aliyari, S. R., Ghaffari, A. A., Pernet, O., Parvatiyar, K., Wang, Y., Gerami, H., Tong, A. J., Vergnes, L., Takallou, A., Zhang, A., Wei, X., Chilin, L. D., Wu, Y., Semenkovich, C. F., Reue, K., Smale, S. T., Lee, B. & Cheng, G., Apr 2022, In: Acta Pharmaceutica Sinica B. 12, 4, p. 1624-1635 12 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    16 Scopus citations
  • The IgA in milk induced by SARS-CoV-2 infection is comprised of mainly secretory antibody that is neutralizing and highly durable over time

    Fox, A., Marino, J., Amanat, F., Oguntuyo, K. Y., Hahn-Holbrook, J., Lee, B., Zolla-Pazner, S. & Powell, R. L., Mar 2022, In: PLoS ONE. 17, 3 March, e0249723.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    18 Scopus citations
  • The RNA helicase DHX16 recognizes specific viral RNA to trigger RIG-I-dependent innate antiviral immunity

    Hage, A., Bharaj, P., van Tol, S., Giraldo, M. I., Gonzalez-Orozco, M., Valerdi, K. M., Warren, A. N., Aguilera-Aguirre, L., Xie, X., Widen, S. G., Moulton, H. M., Lee, B., Johnson, J. R., Krogan, N. J., García-Sastre, A., Shi, P. Y., Freiberg, A. N. & Rajsbaum, R., 8 Mar 2022, In: Cell Reports. 38, 10, 110434.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    23 Scopus citations
  • 2021

    2021 Taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

    Kuhn, J. H., Adkins, S., Agwanda, B. R., Al Kubrusli, R., Alkhovsky, S. V., Amarasinghe, G. K., Avšič-Županc, T., Ayllón, M. A., Bahl, J., Balkema-Buschmann, A., Ballinger, M. J., Basler, C. F., Bavari, S., Beer, M., Bejerman, N., Bennett, A. J., Bente, D. A., Bergeron, É., Bird, B. H. & Blair, C. D. & 231 others, Blasdell, K. R., Blystad, D. R., Bojko, J., Borth, W. B., Bradfute, S., Breyta, R., Briese, T., Brown, P. A., Brown, J. K., Buchholz, U. J., Buchmeier, M. J., Bukreyev, A., Burt, F., Büttner, C., Calisher, C. H., Cao, M., Casas, I., Chandran, K., Charrel, R. N., Cheng, Q., Chiaki, Y., Chiapello, M., Choi, I. R., Ciuffo, M., Clegg, J. C. S., Crozier, I., Dal Bó, E., de la Torre, J. C., de Lamballerie, X., de Swart, R. L., Debat, H., Dheilly, N. M., Di Cicco, E., Di Paola, N., Di Serio, F., Dietzgen, R. G., Digiaro, M., Dolnik, O., Drebot, M. A., Drexler, J. F., Dundon, W. G., Duprex, W. P., Dürrwald, R., Dye, J. M., Easton, A. J., Ebihara, H., Elbeaino, T., Ergünay, K., Ferguson, H. W., Fooks, A. R., Forgia, M., Formenty, P. B. H., Fránová, J., Freitas-Astúa, J., Fu, J., Fürl, S., Gago-Zachert, S., Gāo, G. F., García, M. L., García-Sastre, A., Garrison, A. R., Gaskin, T., Gonzalez, J. P. J., Griffiths, A., Goldberg, T. L., Groschup, M. H., Günther, S., Hall, R. A., Hammond, J., Han, T., Hepojoki, J., Hewson, R., Hong, J., Hong, N., Hongo, S., Horie, M., Hu, J. S., Hu, T., Hughes, H. R., Hüttner, F., Hyndman, T. H., Ilyas, M., Jalkanen, R., Jiāng, D., Jonson, G. B., Junglen, S., Kadono, F., Kaukinen, K. H., Kawate, M., Klempa, B., Klingström, J., Kobinger, G., Koloniuk, I., Kondō, H., Koonin, E. V., Krupovic, M., Kubota, K., Kurath, G., Laenen, L., Lambert, A. J., Langevin, S. L., Lee, B., Lefkowitz, E. J., Leroy, E. M., Li, S., Li, L., Lǐ, J., Liu, H., Lukashevich, I. S., Maes, P., de Souza, W. M., Marklewitz, M., Marshall, S. H., Marzano, S. Y. L., Massart, S., McCauley, J. W., Melzer, M., Mielke-Ehret, N., Miller, K. M., Ming, T. J., Mirazimi, A., Mordecai, G. J., Mühlbach, H. P., Mühlberger, E., Naidu, R., Natsuaki, T., Navarro, J. A., Netesov, S. V., Neumann, G., Nowotny, N., Nunes, M. R. T., Olmedo-Velarde, A., Palacios, G., Pallás, V., Pályi, B., Papa, A., Paraskevopoulou, S., Park, A. C., Parrish, C. R., Patterson, D. A., Pauvolid-Corrêa, A., Pawęska, J. T., Payne, S., Peracchio, C., Pérez, D. R., Postler, T. S., Qi, L., Radoshitzky, S. R., Resende, R. O., Reyes, C. A., Rima, B. K., Luna, G. R., Romanowski, V., Rota, P., Rubbenstroth, D., Rubino, L., Runstadler, J. A., Sabanadzovic, S., Sall, A. A., Salvato, M. S., Sang, R., Sasaya, T., Schulze, A. D., Schwemmle, M., Shi, M., Shí, X., Shí, Z., Shimomoto, Y., Shirako, Y., Siddell, S. G., Simmonds, P., Sironi, M., Smagghe, G., Smither, S., Song, J. W., Spann, K., Spengler, J. R., Stenglein, M. D., Stone, D. M., Sugano, J., Suttle, C. A., Tabata, A., Takada, A., Takeuchi, S., Tchouassi, D. P., Teffer, A., Tesh, R. B., Thornburg, N. J., Tomitaka, Y., Tomonaga, K., Tordo, N., Torto, B., Towner, J. S., Tsuda, S., Tu, C., Turina, M., Tzanetakis, I. E., Uchida, J., Usugi, T., Vaira, A. M., Vallino, M., van den Hoogen, B., Varsani, A., Vasilakis, N., Verbeek, M., von Bargen, S., Wada, J., Wahl, V., Walker, P. J., Wang, L. F., Wang, G., Wang, Y., Wang, Y., Waqas, M., Wèi, T., Wen, S., Whitfield, A. E., Williams, J. V., Wolf, Y. I., Wu, J., Xu, L., Yanagisawa, H., Yang, C., Yang, Z., Zerbini, F. M., Zhai, L., Zhang, Y. Z., Zhang, S., Zhang, J., Zhang, Z. & Zhou, X., Dec 2021, In: Archives of Virology. 166, 12, p. 3513-3566 54 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    64 Scopus citations
  • Detection of Antibody Responses Against SARS-CoV-2 in Plasma and Saliva From Vaccinated and Infected Individuals

    Klingler, J., Lambert, G. S., Itri, V., Liu, S., Bandres, J. C., Enyindah-Asonye, G., Liu, X., Simon, V., Gleason, C. R., Kleiner, G., Chiu, H. P., Hung, C. T., Kowdle, S., Amanat, F., Lee, B., Zolla-Pazner, S., Upadhyay, C. & Hioe, C. E., 20 Dec 2021, In: Frontiers in Immunology. 12, 759688.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    24 Scopus citations
  • Dissecting ELANE neutropenia pathogenicity by human HSC gene editing

    Rao, S., Yao, Y., Soares de Brito, J., Yao, Q., Shen, A. H., Watkinson, R. E., Kennedy, A. L., Coyne, S., Ren, C., Zeng, J., Serbin, A. V., Studer, S., Ballotti, K., Harris, C. E., Luk, K., Stevens, C. S., Armant, M., Pinello, L., Wolfe, S. A. & Chiarle, R. & 4 others, Shimamura, A., Lee, B., Newburger, P. E. & Bauer, D. E., 6 May 2021, In: Cell Stem Cell. 28, 5, p. 833-845.e5

    Research output: Contribution to journalArticlepeer-review

    Open Access
    30 Scopus citations
  • Emergency response for evaluating SARS-CoV-2 immune status, seroprevalence and convalescent plasma in Argentina

    BioBanco Working Group, 14 Jan 2021, In: PLoS Pathogens. 17, 1, e1009161.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    55 Scopus citations
  • Fitness selection of hyperfusogenic measles virus F proteins associated with neuropathogenic phenotypes

    Ikegame, S., Hashiguchi, T., Hung, C. T., Dobrindt, K., Brennand, K. J., Takeda, M. & Lee, B., 4 May 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 18, 2026027118.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    14 Scopus citations
  • Genome-wide CRISPR Screens Reveal Host Factors Critical for SARS-CoV-2 Infection

    Wei, J., Alfajaro, M. M., DeWeirdt, P. C., Hanna, R. E., Lu-Culligan, W. J., Cai, W. L., Strine, M. S., Zhang, S. M., Graziano, V. R., Schmitz, C. O., Chen, J. S., Mankowski, M. C., Filler, R. B., Ravindra, N. G., Gasque, V., de Miguel, F. J., Patil, A., Chen, H., Oguntuyo, K. Y. & Abriola, L. & 11 others, Surovtseva, Y. V., Orchard, R. C., Lee, B., Lindenbach, B. D., Politi, K., van Dijk, D., Kadoch, C., Simon, M. D., Yan, Q., Doench, J. G. & Wilen, C. B., 7 Jan 2021, In: Cell. 184, 1, p. 76-91.e13

    Research output: Contribution to journalArticlepeer-review

    Open Access
    352 Scopus citations
  • Loss of furin cleavage site attenuates SARS-CoV-2 pathogenesis

    Johnson, B. A., Xie, X., Bailey, A. L., Kalveram, B., Lokugamage, K. G., Muruato, A., Zou, J., Zhang, X., Juelich, T., Smith, J. K., Zhang, L., Bopp, N., Schindewolf, C., Vu, M., Vanderheiden, A., Winkler, E. S., Swetnam, D., Plante, J. A., Aguilar, P. & Plante, K. S. & 13 others, Popov, V., Lee, B., Weaver, S. C., Suthar, M. S., Routh, A. L., Ren, P., Ku, Z., An, Z., Debbink, K., Diamond, M. S., Shi, P. Y., Freiberg, A. N. & Menachery, V. D., 11 Mar 2021, In: Nature. 591, 7849, p. 293-299 7 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    439 Scopus citations
  • Neutralizing activity of Sputnik V vaccine sera against SARS-CoV-2 variants

    Ikegame, S., Siddiquey, M. N. A., Hung, C. T., Haas, G., Brambilla, L., Oguntuyo, K. Y., Kowdle, S., Chiu, H. P., Stevens, C. S., Vilardo, A. E., Edelstein, A., Perandones, C., Kamil, J. P. & Lee, B., 1 Dec 2021, In: Nature Communications. 12, 1, 4598.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    73 Scopus citations
  • Open Access
    42 Scopus citations
  • Reduced Nucleoprotein Availability Impairs Negative-Sense RNA Virus Replication and Promotes Host Recognition

    Nilsson-Payant, B. E., Blanco-Melo, D., Uhl, S., Escudero-Pérez, B., Olschewski, S., Thibault, P., Panis, M., Rosenthal, M., Muñoz-Fontela, C., Lee, B. & tenOever, B. R., May 2021, In: Journal of Virology. 95, 9, e02274-20.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    24 Scopus citations
  • Role of Immunoglobulin M and A Antibodies in the Neutralization of Severe Acute Respiratory Syndrome Coronavirus 2

    Klingler, J., Weiss, S., Itri, V., Liu, X., Oguntuyo, K. Y., Stevens, C., Ikegame, S., Hung, C. T., Enyindah-Asonye, G., Amanat, F., Baine, I., Arinsburg, S., Bandres, J. C., Kojic, E. M., Stoever, J., Jurczyszak, D., Bermudez-Gonzalez, M., NÃidas, A., Liu, S. & Lee, B. & 2 others, Zolla-Pazner, S. & Hioe, C. E., 15 Mar 2021, In: Journal of Infectious Diseases. 223, 6, p. 957-970 14 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    46 Scopus citations
  • SARS-CoV-2 proteases PLpro and 3CLpro cleave IRF3 and critical modulators of inflammatory pathways (NLRP12 and TAB1): implications for disease presentation across species

    Moustaqil, M., Ollivier, E., Chiu, H. P., Van Tol, S., Rudolffi-Soto, P., Stevens, C., Bhumkar, A., Hunter, D. J. B., Freiberg, A. N., Jacques, D., Lee, B., Sierecki, E. & Gambin, Y., 2021, In: Emerging Microbes and Infections. 10, 1, p. 178-195 18 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    170 Scopus citations
  • 2020

    2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

    Kuhn, J. H., Adkins, S., Alioto, D., Alkhovsky, S. V., Amarasinghe, G. K., Anthony, S. J., Avšič-Županc, T., Ayllón, M. A., Bahl, J., Balkema-Buschmann, A., Ballinger, M. J., Bartonička, T., Basler, C., Bavari, S., Beer, M., Bente, D. A., Bergeron, É., Bird, B. H., Blair, C. & Blasdell, K. R. & 209 others, Bradfute, S. B., Breyta, R., Briese, T., Brown, P. A., Buchholz, U. J., Buchmeier, M. J., Bukreyev, A., Burt, F., Buzkan, N., Calisher, C. H., Cao, M., Casas, I., Chamberlain, J., Chandran, K., Charrel, R. N., Chen, B., Chiumenti, M., Choi, I. R., Clegg, J. C. S., Crozier, I., da Graça, J. V., Dal Bó, E., Dávila, A. M. R., de la Torre, J. C., de Lamballerie, X., de Swart, R. L., Di Bello, P. L., Di Paola, N., Di Serio, F., Dietzgen, R. G., Digiaro, M., Dolja, V. V., Dolnik, O., Drebot, M. A., Drexler, J. F., Dürrwald, R., Dufkova, L., Dundon, W. G., Duprex, W. P., Dye, J. M., Easton, A. J., Ebihara, H., Elbeaino, T., Ergünay, K., Fernandes, J., Fooks, A. R., Formenty, P. B. H., Forth, L. F., Fouchier, R. A. M., Freitas-Astúa, J., Gago-Zachert, S., Gāo, G. F., García, M. L., García-Sastre, A., Garrison, A. R., Gbakima, A., Goldstein, T., Gonzalez, J. P. J., Griffiths, A., Groschup, M. H., Günther, S., Guterres, A., Hall, R. A., Hammond, J., Hassan, M., Hepojoki, J., Hepojoki, S., Hetzel, U., Hewson, R., Hoffmann, B., Hongo, S., Höper, D., Horie, M., Hughes, H. R., Hyndman, T. H., Jambai, A., Jardim, R., Jiāng, D., Jin, Q., Jonson, G. B., Junglen, S., Karadağ, S., Keller, K. E., Klempa, B., Klingström, J., Kobinger, G., Kondō, H., Koonin, E. V., Krupovic, M., Kurath, G., Kuzmin, I. V., Laenen, L., Lamb, R. A., Lambert, A. J., Langevin, S. L., Lee, B., Lemos, E. R. S., Leroy, E. M., Li, D., Lǐ, J., Liang, M., Liú, W., Liú, Y., Lukashevich, I. S., Maes, P., Marciel de Souza, W., Marklewitz, M., Marshall, S. H., Martelli, G. P., Martin, R. R., Marzano, S. Y. L., Massart, S., McCauley, J. W., Mielke-Ehret, N., Minafra, A., Minutolo, M., Mirazimi, A., Mühlbach, H. P., Mühlberger, E., Naidu, R., Natsuaki, T., Navarro, B., Navarro, J. A., Netesov, S. V., Neumann, G., Nowotny, N., Nunes, M. R. T., Nylund, A., Økland, A. L., Oliveira, R. C., Palacios, G., Pallas, V., Pályi, B., Papa, A., Parrish, C. R., Pauvolid-Corrêa, A., Pawęska, J. T., Payne, S., Pérez, D. R., Pfaff, F., Radoshitzky, S. R., Rahman, A. U., Ramos-González, P. L., Resende, R. O., Reyes, C. A., Rima, B. K., Romanowski, V., Robles Luna, G., Rota, P., Rubbenstroth, D., Runstadler, J. A., Ruzek, D., Sabanadzovic, S., Salát, J., Sall, A. A., Salvato, M. S., Sarpkaya, K., Sasaya, T., Schwemmle, M., Shabbir, M. Z., Shí, X., Shí, Z., Shirako, Y., Simmonds, P., Širmarová, J., Sironi, M., Smither, S., Smura, T., Song, J. W., Spann, K. M., Spengler, J. R., Stenglein, M. D., Stone, D. M., Straková, P., Takada, A., Tesh, R. B., Thornburg, N. J., Tomonaga, K., Tordo, N., Towner, J. S., Turina, M., Tzanetakis, I., Ulrich, R. G., Vaira, A. M., van den Hoogen, B., Varsani, A., Vasilakis, N., Verbeek, M., Wahl, V., Walker, P. J., Wang, H., Wang, J., Wang, X., Wang, L. F., Wèi, T., Wells, H., Whitfield, A. E., Williams, J. V., Wolf, Y. I., Wú, Z., Yang, X., Yáng, X., Yu, X., Yutin, N., Zerbini, F. M., Zhang, T., Zhang, Y. Z., Zhou, G. & Zhou, X., 1 Dec 2020, In: Archives of Virology. 165, 12, p. 3023-3072 50 p.

    Research output: Contribution to journalArticlepeer-review

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    166 Scopus citations
  • A key region of molecular specificity orchestrates unique ephrin-B1 utilization by Cedar virus

    Pryce, R., Azarm, K., Rissanen, I., Harlos, K., Bowden, T. A. & Lee, B., 2020, In: Life Science Alliance. 3, 1, e201900578.

    Research output: Contribution to journalArticlepeer-review

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    20 Scopus citations
  • Genome-wide transposon mutagenesis of paramyxoviruses reveals constraints on genomic plasticity

    Ikegame, S., Beaty, S. M., Stevens, C., Won, S. T., Park, A., Sachs, D., Hong, P., Lee, B. & Thibault, P. A., 9 Oct 2020, In: PLoS Pathogens. 16, 10, e1008877.

    Research output: Contribution to journalArticlepeer-review

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    3 Scopus citations
  • Nipah@20: Lessons learned from another virus with pandemic potential

    Román, R. G., Wang, L. F., Lee, B., Halpin, K., de Wit, E., Broder, C. C., Rahman, M., Kristiansen, P. & Saville, M., 1 Jul 2020, In: mSphere. 5, 4, e00602.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    21 Scopus citations
  • Orally efficacious broad-spectrum allosteric inhibitor of paramyxovirus polymerase

    Cox, R. M., Sourimant, J., Toots, M., Yoon, J. J., Ikegame, S., Govindarajan, M., Watkinson, R. E., Thibault, P., Makhsous, N., Lin, M. J., Marengo, J. R., Sticher, Z., Kolykhalov, A. A., Natchus, M. G., Greninger, A. L., Lee, B. & Plemper, R. K., 1 Oct 2020, In: Nature Microbiology. 5, 10, p. 1232-1246 15 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    17 Scopus citations
  • The viral polymerase complex mediates the interaction of viral ribonucleoprotein complexes with recycling endosomes during sendai virus assembly

    Genoyer, E., Kulej, K., Hung, C. T., Thibault, P. A., Azarm, K., Takimoto, T., Garcia, B. A., Lee, B., Lakdawala, S., Weitzman, M. D. & López, C. B., 1 Jul 2020, In: mBio. 11, 4, p. 1-20 20 p., e02028-20.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    9 Scopus citations
  • 2019

    A structural basis for antibody-mediated neutralization of Nipah virus reveals a site of vulnerability at the fusion glycoprotein apex

    Avanzato, V. A., Oguntuyo, K. Y., Escalera-Zamudio, M., Gutierrez, B., Golden, M., Kosakovsky Pond, S. L., Pryce, R., Walter, T. S., Seow, J., Doores, K. J., Pybus, O. G., Munster, V. J., Lee, B. & Bowden, T. A., 10 Dec 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 50, p. 25057-25067 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    38 Scopus citations
  • ICTV Virus Taxonomy Profile: Paramyxoviridae

    ICTV Report Consortium, 2019, In: Journal of General Virology. 100, 12, p. 1593-1594 2 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    207 Scopus citations
  • Taxonomy of the order Mononegavirales: second update 2018

    Maes, P., Amarasinghe, G. K., Ayllón, M. A., Basler, C. F., Bavari, S., Blasdell, K. R., Briese, T., Brown, P. A., Bukreyev, A., Balkema-Buschmann, A., Buchholz, U. J., Chandran, K., Crozier, I., de Swart, R. L., Dietzgen, R. G., Dolnik, O., Domier, L. L., Drexler, J. F., Dürrwald, R. & Dundon, W. G. & 57 others, Duprex, W. P., Dye, J. M., Easton, A. J., Fooks, A. R., Formenty, P. B. H., Fouchier, R. A. M., Freitas-Astúa, J., Ghedin, E., Griffiths, A., Hewson, R., Horie, M., Hurwitz, J. L., Hyndman, T. H., Jiāng, D., Kobinger, G. P., Kondō, H., Kurath, G., Kuzmin, I. V., Lamb, R. A., Lee, B., Leroy, E. M., Lǐ, J., Marzano, S. Y. L., Mühlberger, E., Netesov, S. V., Nowotny, N., Palacios, G., Pályi, B., Pawęska, J. T., Payne, S. L., Rima, B. K., Rota, P., Rubbenstroth, D., Simmonds, P., Smither, S. J., Song, Q., Song, T., Spann, K., Stenglein, M. D., Stone, D. M., Takada, A., Tesh, R. B., Tomonaga, K., Tordo, N., Towner, J. S., van den Hoogen, B., Vasilakis, N., Wahl, V., Walker, P. J., Wang, D., Wang, L. F., Whitfield, A. E., Williams, J. V., Yè, G., Zerbini, F. M., Zhang, Y. Z. & Kuhn, J. H., 3 Apr 2019, In: Archives of Virology. 164, 4, p. 1233-1244 12 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    75 Scopus citations
  • Taxonomy of the order Mononegavirales: update 2019

    Amarasinghe, G. K., Ayllón, M. A., Bào, Y., Basler, C. F., Bavari, S., Blasdell, K. R., Briese, T., Brown, P. A., Bukreyev, A., Balkema-Buschmann, A., Buchholz, U. J., Chabi-Jesus, C., Chandran, K., Chiapponi, C., Crozier, I., de Swart, R. L., Dietzgen, R. G., Dolnik, O., Drexler, J. F. & Dürrwald, R. & 64 others, Dundon, W. G., Duprex, W. P., Dye, J. M., Easton, A. J., Fooks, A. R., Formenty, P. B. H., Fouchier, R. A. M., Freitas-Astúa, J., Griffiths, A., Hewson, R., Horie, M., Hyndman, T. H., Jiāng, D., Kitajima, E. W., Kobinger, G. P., Kondō, H., Kurath, G., Kuzmin, I. V., Lamb, R. A., Lavazza, A., Lee, B., Lelli, D., Leroy, E. M., Lǐ, J., Maes, P., Marzano, S. Y. L., Moreno, A., Mühlberger, E., Netesov, S. V., Nowotny, N., Nylund, A., Økland, A. L., Palacios, G., Pályi, B., Pawęska, J. T., Payne, S. L., Prosperi, A., Ramos-González, P. L., Rima, B. K., Rota, P., Rubbenstroth, D., Shī, M., Simmonds, P., Smither, S. J., Sozzi, E., Spann, K., Stenglein, M. D., Stone, D. M., Takada, A., Tesh, R. B., Tomonaga, K., Tordo, N., Towner, J. S., van den Hoogen, B., Vasilakis, N., Wahl, V., Walker, P. J., Wang, L. F., Whitfield, A. E., Williams, J. V., Zerbini, F. M., Zhāng, T., Zhang, Y. Z. & Kuhn, J. H., 1 Jul 2019, In: Archives of Virology. 164, 7, p. 1967-1980 14 p.

    Research output: Contribution to journalArticlepeer-review

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    243 Scopus citations
  • 2018

    Evolution of codon usage bias in henipaviruses is governed by natural selection and is host-specific

    Kumar, N., Kulkarni, D. D., Lee, B., Kaushik, R., Bhatia, S., Sood, R., Pateriya, A. K., Bhat, S. & Singh, V. P., 1 Nov 2018, In: Viruses. 10, 11, 604.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    37 Scopus citations
  • Experimental Infection of Syrian Hamsters with Aerosolized Nipah Virus

    Escaffre, O., Hill, T., Ikegami, T., Juelich, T. L., Smith, J. K., Zhang, L., Perez, D. E., Atkins, C., Park, A., Lawrence, W. S., Sivasubramani, S. K., Peel, J. E., Peterson, J. W., Lee, B. & Freiberg, A. N., 5 Oct 2018, In: Journal of Infectious Diseases. 218, 10, p. 1602-1610 9 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    17 Scopus citations
  • Favipiravir (T-705) protects against Nipah virus infection in the hamster model /631/326/22/1295 /631/326/596/1296 /13/106 /14/35 /38/77 /82/51 /96/63 article

    Dawes, B. E., Kalveram, B., Ikegami, T., Juelich, T., Smith, J. K., Zhang, L., Park, A., Lee, B., Komeno, T., Furuta, Y. & Freiberg, A. N., 1 Dec 2018, In: Scientific Reports. 8, 1, 7604.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    87 Scopus citations
  • IL-15 regulates susceptibility of CD4+ T cells to HIV infection

    Manganaro, L., Hong, P., Hernandez, M. M., Argyle, D., Mulder, L. C. F., Potla, U., Diaz-Griffero, F., Lee, B., Fernandez-Sesma, A. & Simon, V., 9 Oct 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 41, p. E9659-E9667

    Research output: Contribution to journalArticlepeer-review

    Open Access
    41 Scopus citations
  • Problems of classification in the family Paramyxoviridae

    Rima, B., Collins, P., Easton, A., Fouchier, R., Kurath, G., Lamb, R. A., Lee, B., Maisner, A., Rota, P. & Wang, L. F., 1 May 2018, In: Archives of Virology. 163, 5, p. 1395-1404 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    30 Scopus citations
  • Taxonomy of the order Mononegavirales: update 2018

    Amarasinghe, G. K., Aréchiga Ceballos, N. G., Banyard, A. C., Basler, C. F., Bavari, S., Bennett, A. J., Blasdell, K. R., Briese, T., Bukreyev, A., Caì, Y., Calisher, C. H., Campos Lawson, C., Chandran, K., Chapman, C. A., Chiu, C. Y., Choi, K. S., Collins, P. L., Dietzgen, R. G., Dolja, V. V. & Dolnik, O. & 71 others, Domier, L. L., Dürrwald, R., Dye, J. M., Easton, A. J., Ebihara, H., Echevarría, J. E., Fooks, A. R., Formenty, P. B. H., Fouchier, R. A. M., Freuling, C. M., Ghedin, E., Goldberg, T. L., Hewson, R., Horie, M., Hyndman, T. H., Jiāng, D., Kityo, R., Kobinger, G. P., Kondō, H., Koonin, E. V., Krupovic, M., Kurath, G., Lamb, R. A., Lee, B., Leroy, E. M., Maes, P., Maisner, A., Marston, D. A., Mor, S. K., Müller, T., Mühlberger, E., Ramírez, V. M. N., Netesov, S. V., Ng, T. F. F., Nowotny, N., Palacios, G., Patterson, J. L., Pawęska, J. T., Payne, S. L., Prieto, K., Rima, B. K., Rota, P., Rubbenstroth, D., Schwemmle, M., Siddell, S., Smither, S. J., Song, Q., Song, T., Stenglein, M. D., Stone, D. M., Takada, A., Tesh, R. B., Thomazelli, L. M., Tomonaga, K., Tordo, N., Towner, J. S., Vasilakis, N., Vázquez-Morón, S., Verdugo, C., Volchkov, V. E., Wahl, V., Walker, P. J., Wang, D., Wang, L. F., Wellehan, J. F. X., Wiley, M. R., Whitfield, A. E., Wolf, Y. I., Yè, G., Zhāng, Y. Z. & Kuhn, J. H., 1 Aug 2018, In: Archives of Virology. 163, 8, p. 2283-2294 12 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    145 Scopus citations