Research output per year
Research output per year
Personal profile
Headline
ASSISTANT PROFESSOR | Genetics and Genomic Sciences
Biography
BS, University of California, Berkeley PhD, University of California, San Diego
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Dive into the research topics where Ali Bashir is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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NPSV-deep: a deep learning method for genotyping structural variants in short read genome sequencing data
Linderman, M. D., Wallace, J., van der Heyde, A., Wieman, E., Brey, D., Shi, Y., Hansen, P., Shamsi, Z., Liu, J., Gelb, B. D. & Bashir, A., 1 Mar 2024, In: Bioinformatics. 40, 3, btae129.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Characterization of the immunoglobulin lambda chain locus from diverse populations reveals extensive genetic variation
Gibson, W. S., Rodriguez, O. L., Shields, K., Silver, C. A., Dorgham, A., Emery, M., Deikus, G., Sebra, R., Eichler, E. E., Bashir, A., Smith, M. L. & Watson, C. T., Feb 2023, In: Genes and Immunity. 24, 1, p. 21-31 11 p.Research output: Contribution to journal › Article › peer-review
Open Access34 Scopus citations -
Longitudinal fundus imaging and its genome-wide association analysis provide evidence for a human retinal aging clock
Ahadi, S., Wilson, K. A., Babenko, B., McLean, C. Y., Bryant, D., Pritchard, O., Kumar, A., Carrera, E. M., Lamy, R., Stewart, J. M., Varadarajan, A., Berndl, M., Kapahi, P. & Bashir, A., 17 Apr 2023, In: eLife. 12Research output: Contribution to journal › Article › peer-review
Open Access42 Scopus citations -
ProtSeq: Toward high-throughput, single-molecule protein sequencing via amino acid conversion into DNA barcodes
Hong, J. M., Gibbons, M., Bashir, A., Wu, D., Shao, S., Cutts, Z., Chavarha, M., Chen, Y., Schiff, L., Foster, M., Church, V. A., Ching, L., Ahadi, S., Hieu-Thao Le, A., Tran, A., Dimon, M., Coram, M., Williams, B., Jess, P. & Berndl, M. & 1 others, , 21 Jan 2022, In: iScience. 25, 1, 103586.Research output: Contribution to journal › Article › peer-review
Open Access14 Scopus citations -
Deep diversification of an AAV capsid protein by machine learning
Bryant, D. H., Bashir, A., Sinai, S., Jain, N. K., Ogden, P. J., Riley, P. F., Church, G. M., Colwell, L. J. & Kelsic, E. D., Jun 2021, In: Nature Biotechnology. 39, 6, p. 691-696 6 p.Research output: Contribution to journal › Article › peer-review
Open Access254 Scopus citations
Press/Media
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Australia: Google Receives Patent for 'Methods and compositions for protein and peptide sequencing'
10/05/24
1 item of Media coverage
Press/Media
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US Patent Issued to Google on March 12 for "Methods and compositions for protein and peptide sequencing" (California Inventors)
12/03/24
1 item of Media coverage
Press/Media
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Australia Patent: Google Files Application for 'Methods and compositions for protein and peptide sequencing'
8/03/22
1 item of Media coverage
Press/Media